Difference between revisions of "FISUC RS07620"

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(Created page with "Category:reaction == Reaction 2.7.7.15-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.15 ec-2.7.7.15] * direction: ** left-to-right == Reaction formula == * 1 [...")
 
(Created page with "Category:gene == Gene FISUC_RS07620 == * common-name: ** lpxa * transcription-direction: ** positive * centisome-position: ** 48.362724 * left-end-position: ** 1858403...")
 
(15 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction 2.7.7.15-RXN ==
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== Gene FISUC_RS07620 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/2.7.7.15 ec-2.7.7.15]
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** lpxa
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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== Reaction formula ==
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* centisome-position:
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* 1 [[CTP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CDP-CHOLINE]][c] '''+''' 1 [[PPI]][c]
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** 48.362724   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS01725]]
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** 1858403
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** Category: [[manual]]
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* right-end-position:
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*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
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** 1859170
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== Pathway(s) ==
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== Organism(s) associated with this gene  ==
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* [[PWY-3561]], choline biosynthesis III:
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* [[fsucgem]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reaction(s) associated ==
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* [[PWY4FS-2]], phosphatidylcholine biosynthesis II:
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* [[UDPNACETYLGLUCOSAMACYLTRANS-RXN]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY3O-450]], phosphatidylcholine biosynthesis I:
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Pathway(s) associated ==
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* [[PWY-7782]], plasmalogen biosynthesis:
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* [[NAGLIPASYN-PWY]]
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** '''2''' reactions found over '''16''' reactions in the full pathway
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7886]], cell-surface glycoconjugate-linked phosphocholine biosynthesis:
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{{#set: common-name=lpxa}}
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** '''1''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae):
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{{#set: centisome-position=48.362724    }}
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** '''1''' reactions found over '''19''' reactions in the full pathway
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{{#set: left-end-position=1858403}}
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== Reconstruction information  ==
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{{#set: right-end-position=1859170}}
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* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: present in the orthology part of the emile network.
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{{#set: organism associated=fsucgem}}
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== External links  ==
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{{#set: nb reaction associated=1}}
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* RHEA:
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{{#set: nb pathway associated=1}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18998 18998]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01890 R01890]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P19836 P19836]
 
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** [http://www.uniprot.org/uniprot/P49586 P49586]
 
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** [http://www.uniprot.org/uniprot/P49584 P49584]
 
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** [http://www.uniprot.org/uniprot/P49585 P49585]
 
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** [http://www.uniprot.org/uniprot/P49587 P49587]
 
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** [http://www.uniprot.org/uniprot/P93470 P93470]
 
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** [http://www.uniprot.org/uniprot/Q42619 Q42619]
 
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** [http://www.uniprot.org/uniprot/Q42620 Q42620]
 
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** [http://www.uniprot.org/uniprot/Q42621 Q42621]
 
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** [http://www.uniprot.org/uniprot/Q42622 Q42622]
 
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** [http://www.uniprot.org/uniprot/P13259 P13259]
 
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{{#set: ec-number=ec-2.7.7.15}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=manual}}
 
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{{#set: reconstruction tool=curation}}
 
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{{#set: reconstruction comment=present in the orthology part of the emile network.}}
 
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{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS07620

  • common-name:
    • lpxa
  • transcription-direction:
    • positive
  • centisome-position:
    • 48.362724
  • left-end-position:
    • 1858403
  • right-end-position:
    • 1859170

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS07620&oldid=94378"