Difference between revisions of "4-P-PANTOTHENATE"

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(Created page with "Category:gene == Gene FSU_RS14845 == * transcription-direction: ** positive * centisome-position: ** 93.8216 * left-end-position: ** 3605568 * right-end-position: ** 3...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene FISUC_RS08710 ==
+
== Gene FSU_RS14845 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* centisome-position:
 
* centisome-position:
−
** 55.5708    
+
** 93.8216    
 
* left-end-position:
 
* left-end-position:
−
** 2135383
+
** 3605568
 
* right-end-position:
 
* right-end-position:
−
** 2136954
+
** 3605831
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_08072020]]
+
* [[fibrobacter_24072020]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN0-5359]]
+
* [[CHORISMATEMUT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
** Category: [[orthology]]
−
{{#set: centisome-position=55.5708   }}
+
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
−
{{#set: left-end-position=2135383}}
+
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
{{#set: right-end-position=2136954}}
+
* [[PREPHENATE-DEHYDROGENASE-NADP+-RXN]]
−
{{#set: organism associated=fibrobacter_08072020}}
+
** Category: [[orthology]]
−
{{#set: nb reaction associated=1}}
+
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* [[PREPHENATEDEHYDROG-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PHESYN]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3462]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7626]]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6627]]
 +
** '''1''' reactions found over '''15''' reactions in the full pathway
 +
* [[TYRSYN]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6120]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3461]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7303]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: centisome-position=93.8216   }}
 +
{{#set: left-end-position=3605568}}
 +
{{#set: right-end-position=3605831}}
 +
{{#set: organism associated=fibrobacter_24072020}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=8}}

Revision as of 21:47, 24 July 2020

Gene FSU_RS14845

  • transcription-direction:
    • positive
  • centisome-position:
    • 93.8216
  • left-end-position:
    • 3605568
  • right-end-position:
    • 3605831

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PHESYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3462
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7626
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-6627
    • 1 reactions found over 15 reactions in the full pathway
  • TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6120
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3461
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7303
    • 1 reactions found over 4 reactions in the full pathway




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