Difference between revisions of "FSU RS00180"

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(Created page with "Category:reaction == Reaction GLUTAMATE-DEHYDROGENASE-NADP+-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.3 ec-1.4.1.3] * direction: ** reversible == Reaction...")
(Created page with "Category:gene == Gene FSU_RS00180 == * transcription-direction: ** negative * centisome-position: ** 1.041581 * left-end-position: ** 40028 * right-end-position: ** 41...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction GLUTAMATE-DEHYDROGENASE-NADP+-RXN ==
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== Gene FSU_RS00180 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/1.4.1.3 ec-1.4.1.3]
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** negative
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* direction:
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* centisome-position:
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** reversible
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** 1.041581   
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== Reaction formula ==
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* left-end-position:
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* 1 [[GLT]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
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** 40028
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== Gene(s) associated with this reaction  ==
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* right-end-position:
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== Pathway(s)  ==
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** 41236
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* [[GLUDEG-I-PWY]], GABA shunt:
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== Organism(s) associated with this gene  ==
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[fsucgem]]
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* [[PWY-5766]], L-glutamate degradation X:
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== Reaction(s) associated ==
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[S-ADENMETSYN-RXN]]
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* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II:
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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== Pathway(s) associated ==
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* [[METHIONINE-DEG1-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5041]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[GLUTAMATE-SYN2-PWY]], L-glutamate biosynthesis II:
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* [[SAM-PWY]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* [[ETHYL-PWY]]
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* category: [[manual]]; source: [[reactions_add_ibrahim_03112020]]; tool: [[curation]]; comment: to improve flux in adenosylcobalamin
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== External links  ==
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* [[PWY-5912]]
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* UNIPROT:
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** '''1''' reactions found over '''4''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P49448 P49448]
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{{#set: transcription-direction=negative}}
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** [http://www.uniprot.org/uniprot/P00366 P00366]
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{{#set: centisome-position=1.041581    }}
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** [http://www.uniprot.org/uniprot/P00368 P00368]
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{{#set: left-end-position=40028}}
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** [http://www.uniprot.org/uniprot/P00367 P00367]
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{{#set: right-end-position=41236}}
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** [http://www.uniprot.org/uniprot/Q7LZR0 Q7LZR0]
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{{#set: organism associated=fsucgem}}
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** [http://www.uniprot.org/uniprot/P10860 P10860]
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{{#set: nb reaction associated=1}}
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** [http://www.uniprot.org/uniprot/P26443 P26443]
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{{#set: nb pathway associated=5}}
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** [http://www.uniprot.org/uniprot/P80053 P80053]
 
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** [http://www.uniprot.org/uniprot/Q9UWM2 Q9UWM2]
 
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** [http://www.uniprot.org/uniprot/P42174 P42174]
 
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** [http://www.uniprot.org/uniprot/P52596 P52596]
 
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** [http://www.uniprot.org/uniprot/P96110 P96110]
 
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{{#set: ec-number=ec-1.4.1.3}}
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=0}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=manual}}
 
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{{#set: reconstruction tool=curation}}
 
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{{#set: reconstruction comment=to improve flux in adenosylcobalamin}}
 
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{{#set: reconstruction source=reactions_add_ibrahim_03112020}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS00180

  • transcription-direction:
    • negative
  • centisome-position:
    • 1.041581
  • left-end-position:
    • 40028
  • right-end-position:
    • 41236

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • METHIONINE-DEG1-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5041
    • 4 reactions found over 4 reactions in the full pathway
  • SAM-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • ETHYL-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5912
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS00180&oldid=94589"