Difference between revisions of "FSU RS00180"

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(Created page with "Category:reaction == Reaction 2-HALOACID-DEHALOGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.8.1.10 ec-3.8.1.10] ** [http://enzyme.expasy.org/EC/3.8.1.2 ec-...")
(Created page with "Category:gene == Gene FSU_RS00180 == * transcription-direction: ** negative * centisome-position: ** 1.041581 * left-end-position: ** 40028 * right-end-position: ** 41...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction 2-HALOACID-DEHALOGENASE-RXN ==
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== Gene FSU_RS00180 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/3.8.1.10 ec-3.8.1.10]
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** negative
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** [http://enzyme.expasy.org/EC/3.8.1.2 ec-3.8.1.2]
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* centisome-position:
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* direction:
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** 1.041581   
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** left-to-right
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* left-end-position:
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* common-name:
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** 40028
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** haloacid dehalogenase
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* right-end-position:
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== Reaction formula ==
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** 41236
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* 1 [[S-2-Haloacids]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2R-Hydroxy-Fatty-Acids]][c] '''+''' 1 [[Halide-Anions]][c] '''+''' 1 [[PROTON]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[fsucgem]]
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* Gene: [[FISUC_RS04815]]
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== Reaction(s) associated ==
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* [[S-ADENMETSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS10270]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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* Gene: [[FSU_RS12230]]
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*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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** Category: [[annotation]]
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*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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== Pathway(s)  ==
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== Pathway(s) associated ==
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== Reconstruction information  ==
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* [[METHIONINE-DEG1-PWY]]
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== External links  ==
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* [[PWY-5041]]
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* RHEA:
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11193 11193]
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* [[SAM-PWY]]
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* LIGAND-RXN:
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** [http://www.genome.jp/dbget-bin/www_bget?R03830 R03830]
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* [[ETHYL-PWY]]
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* UNIPROT:
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P24069 P24069]
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* [[PWY-5912]]
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** [http://www.uniprot.org/uniprot/P24070 P24070]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/Q59728 Q59728]
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{{#set: transcription-direction=negative}}
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** [http://www.uniprot.org/uniprot/Q59168 Q59168]
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{{#set: centisome-position=1.041581    }}
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{{#set: ec-number=ec-3.8.1.10|ec-3.8.1.2}}
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{{#set: left-end-position=40028}}
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{{#set: direction=left-to-right}}
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{{#set: right-end-position=41236}}
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{{#set: common-name=haloacid dehalogenase}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb gene associated=3}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=0}}
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{{#set: nb pathway associated=5}}
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS00180

  • transcription-direction:
    • negative
  • centisome-position:
    • 1.041581
  • left-end-position:
    • 40028
  • right-end-position:
    • 41236

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • METHIONINE-DEG1-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5041
    • 4 reactions found over 4 reactions in the full pathway
  • SAM-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • ETHYL-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5912
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS00180&oldid=94589"