Difference between revisions of "FISUC RS03590"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene FSU_RS15345 == * transcription-direction: ** negative * centisome-position: ** 97.44223 * left-end-position: ** 3744709 * right-end-position: **...")
(Created page with "Category:gene == Gene FISUC_RS03590 == * transcription-direction: ** positive * centisome-position: ** 22.147667 * left-end-position: ** 851054 * right-end-position: *...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene FSU_RS15345 ==
+
== Gene FISUC_RS03590 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* centisome-position:
 
* centisome-position:
** 97.44223    
+
** 22.147667    
 
* left-end-position:
 
* left-end-position:
** 3744709
+
** 851054
 
* right-end-position:
 
* right-end-position:
** 3745554
+
** 852937
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[fsucgem]]
 
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[FUMHYDR-RXN]]
+
* [[3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
* [[LTARTDEHYDRA-RXN]]
 
** Category: [[orthology]]
 
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6708]]
* [[P108-PWY]]
+
** '''5''' reactions found over '''8''' reactions in the full pathway
** '''4''' reactions found over '''7''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
* [[TCA]]
+
{{#set: centisome-position=22.147667   }}
** '''10''' reactions found over '''10''' reactions in the full pathway
+
{{#set: left-end-position=851054}}
* [[PWY-7254]]
+
{{#set: right-end-position=852937}}
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5690]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY66-398]]
 
** '''7''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-5913]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[REDCITCYC]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6969]]
 
** '''9''' reactions found over '''12''' reactions in the full pathway
 
* [[P105-PWY]]
 
** '''8''' reactions found over '''11''' reactions in the full pathway
 
* [[FERMENTATION-PWY]]
 
** '''14''' reactions found over '''16''' reactions in the full pathway
 
* [[PWY-7384]]
 
** '''8''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-6728]]
 
** '''9''' reactions found over '''19''' reactions in the full pathway
 
* [[PWY-561]]
 
** '''6''' reactions found over '''4''' reactions in the full pathway
 
* [[P42-PWY]]
 
** '''7''' reactions found over '''7''' reactions in the full pathway
 
* [[P23-PWY]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-5392]]
 
** '''8''' reactions found over '''12''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: centisome-position=97.44223   }}
 
{{#set: left-end-position=3744709}}
 
{{#set: right-end-position=3745554}}
 
 
{{#set: organism associated=fsucgem}}
 
{{#set: organism associated=fsucgem}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=16}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS03590

  • transcription-direction:
    • positive
  • centisome-position:
    • 22.147667
  • left-end-position:
    • 851054
  • right-end-position:
    • 852937

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6708
    • 5 reactions found over 8 reactions in the full pathway