Difference between revisions of "FSU RS04975"

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(Created page with "Category:reaction == Reaction L-LACTATE-DEHYDROGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.27 ec-1.1.1.27] * direction: ** reversible == Reaction form...")
(Created page with "Category:gene == Gene FSU_RS04975 == * transcription-direction: ** positive * centisome-position: ** 30.516752 * left-end-position: ** 1172760 * right-end-position: **...")
 
(6 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction L-LACTATE-DEHYDROGENASE-RXN ==
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== Gene FSU_RS04975 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/1.1.1.27 ec-1.1.1.27]
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** positive
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* direction:
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* centisome-position:
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** reversible
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** 30.516752   
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== Reaction formula ==
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* left-end-position:
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* 1 [[L-LACTATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c]
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** 1172760
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== Gene(s) associated with this reaction ==
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* right-end-position:
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* Gene: [[FSU_RS15130]]
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** 1174460
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** Category: [[orthology]]
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== Organism(s) associated with this gene ==
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[fsucgem]]
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Reaction(s) associated ==
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== Pathway(s) ==
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* [[RXN0-5359]]
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* [[P124-PWY]], Bifidobacterium shunt:
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** Category: [[annotation]]
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** '''14''' reactions found over '''15''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[P122-PWY]], heterolactic fermentation:
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{{#set: transcription-direction=positive}}
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** '''17''' reactions found over '''18''' reactions in the full pathway
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{{#set: centisome-position=30.516752    }}
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* [[PWY-5481]], pyruvate fermentation to (S)-lactate:
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{{#set: left-end-position=1172760}}
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: right-end-position=1174460}}
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* [[PWY-6901]], superpathway of glucose and xylose degradation:
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{{#set: organism associated=fsucgem}}
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** '''10''' reactions found over '''8''' reactions in the full pathway
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{{#set: nb reaction associated=1}}
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23447 23447]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00703 R00703]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P04034 P04034]
 
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** [http://www.uniprot.org/uniprot/P04642 P04642]
 
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** [http://www.uniprot.org/uniprot/P06150 P06150]
 
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** [http://www.uniprot.org/uniprot/P20373 P20373]
 
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** [http://www.uniprot.org/uniprot/P13491 P13491]
 
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** [http://www.uniprot.org/uniprot/P22988 P22988]
 
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** [http://www.uniprot.org/uniprot/P56512 P56512]
 
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** [http://www.uniprot.org/uniprot/Q7M1E1 Q7M1E1]
 
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** [http://www.uniprot.org/uniprot/P33571 P33571]
 
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** [http://www.uniprot.org/uniprot/P13743 P13743]
 
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** [http://www.uniprot.org/uniprot/P26283 P26283]
 
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** [http://www.uniprot.org/uniprot/Q01462 Q01462]
 
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** [http://www.uniprot.org/uniprot/Q06176 Q06176]
 
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** [http://www.uniprot.org/uniprot/Q9PNC8 Q9PNC8]
 
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** [http://www.uniprot.org/uniprot/Q59244 Q59244]
 
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** [http://www.uniprot.org/uniprot/P13490 P13490]
 
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** [http://www.uniprot.org/uniprot/P22989 P22989]
 
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** [http://www.uniprot.org/uniprot/P56511 P56511]
 
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** [http://www.uniprot.org/uniprot/Q60176 Q60176]
 
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** [http://www.uniprot.org/uniprot/P33232 P33232]
 
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** [http://www.uniprot.org/uniprot/P00344 P00344]
 
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** [http://www.uniprot.org/uniprot/P00345 P00345]
 
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** [http://www.uniprot.org/uniprot/P00337 P00337]
 
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** [http://www.uniprot.org/uniprot/P00340 P00340]
 
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** [http://www.uniprot.org/uniprot/P00341 P00341]
 
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** [http://www.uniprot.org/uniprot/P07864 P07864]
 
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** [http://www.uniprot.org/uniprot/P07195 P07195]
 
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** [http://www.uniprot.org/uniprot/P00338 P00338]
 
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** [http://www.uniprot.org/uniprot/P00343 P00343]
 
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** [http://www.uniprot.org/uniprot/P00342 P00342]
 
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** [http://www.uniprot.org/uniprot/P06151 P06151]
 
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** [http://www.uniprot.org/uniprot/P00336 P00336]
 
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** [http://www.uniprot.org/uniprot/P00339 P00339]
 
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** [http://www.uniprot.org/uniprot/P13714 P13714]
 
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** [http://www.uniprot.org/uniprot/P50933 P50933]
 
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** [http://www.uniprot.org/uniprot/O23569 O23569]
 
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** [http://www.uniprot.org/uniprot/P47698 P47698]
 
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** [http://www.uniprot.org/uniprot/Q9CII4 Q9CII4]
 
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** [http://www.uniprot.org/uniprot/Q9CGG8 Q9CGG8]
 
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** [http://www.uniprot.org/uniprot/Q07251 Q07251]
 
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** [http://www.uniprot.org/uniprot/Q62545 Q62545]
 
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** [http://www.uniprot.org/uniprot/P42121 P42121]
 
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** [http://www.uniprot.org/uniprot/P42119 P42119]
 
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** [http://www.uniprot.org/uniprot/P42120 P42120]
 
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** [http://www.uniprot.org/uniprot/P42123 P42123]
 
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** [http://www.uniprot.org/uniprot/P19629 P19629]
 
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** [http://www.uniprot.org/uniprot/Q60009 Q60009]
 
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** [http://www.uniprot.org/uniprot/Q27888 Q27888]
 
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** [http://www.uniprot.org/uniprot/P19869 P19869]
 
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** [http://www.uniprot.org/uniprot/P19858 P19858]
 
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** [http://www.uniprot.org/uniprot/P13715 P13715]
 
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** [http://www.uniprot.org/uniprot/P10655 P10655]
 
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** [http://www.uniprot.org/uniprot/P14561 P14561]
 
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** [http://www.uniprot.org/uniprot/P20619 P20619]
 
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** [http://www.uniprot.org/uniprot/P16125 P16125]
 
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** [http://www.uniprot.org/uniprot/P29038 P29038]
 
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** [http://www.uniprot.org/uniprot/P0C0J3 P0C0J3]
 
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** [http://www.uniprot.org/uniprot/P16115 P16115]
 
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** [http://www.uniprot.org/uniprot/Q48662 Q48662]
 
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** [http://www.uniprot.org/uniprot/Q9ZRJ5 Q9ZRJ5]
 
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** [http://www.uniprot.org/uniprot/O81272 O81272]
 
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** [http://www.uniprot.org/uniprot/Q9SBE4 Q9SBE4]
 
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** [http://www.uniprot.org/uniprot/Q96569 Q96569]
 
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** [http://www.uniprot.org/uniprot/Q96570 Q96570]
 
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** [http://www.uniprot.org/uniprot/P46454 P46454]
 
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</div>
 
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{{#set: ec-number=ec-1.1.1.27}}
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=plantarum|bifidobacterium}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS04975

  • transcription-direction:
    • positive
  • centisome-position:
    • 30.516752
  • left-end-position:
    • 1172760
  • right-end-position:
    • 1174460

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS04975&oldid=94625"