Difference between revisions of "FISUC RS01815"

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(Created page with "Category:reaction == Reaction PHOSNACMURPENTATRANS-RXN == * common-name: ** udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecapreny...")
(Created page with "Category:gene == Gene FISUC_RS01815 == * common-name: ** sure * transcription-direction: ** negative * centisome-position: ** 10.663855 * left-end-position: ** 409773...")
 
(9 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction PHOSNACMURPENTATRANS-RXN ==
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== Gene FISUC_RS01815 ==
 
* common-name:
 
* common-name:
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** udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase
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** sure
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** phospho-n-acetylmuramoyl-pentapeptide- transferase
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* transcription-direction:
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* ec-number:
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** negative
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** [http://enzyme.expasy.org/EC/2.7.8.13 ec-2.7.8.13]
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* centisome-position:
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* direction:
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** 10.663855   
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** left-to-right
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* left-end-position:
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== Reaction formula ==
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** 409773
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* 1 [[C1]][c] '''+''' 1 [[CPD-9646]][c] '''=>''' 1 [[C5]][c] '''+''' 1 [[UMP]][c]
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* right-end-position:
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== Gene(s) associated with this reaction  ==
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** 410594
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* Gene: [[FSU_RS03060]]
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[3-NUCLEOTID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS01180]]
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* [[5-NUCLEOTID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[AMP-DEPHOSPHORYLATION-RXN]]
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* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing):
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** Category: [[annotation]]
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** '''3''' reactions found over '''2''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Reconstruction information  ==
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* [[RXN-14025]]
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[annotation]]
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== External links  ==
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* RHEA:
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* [[RXN-14026]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28387 28387]
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** Category: [[annotation]]
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* LIGAND-RXN:
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.genome.jp/dbget-bin/www_bget?R05630 R05630]
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* [[RXN-14090]]
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* UNIPROT:
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** Category: [[annotation]]
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** [http://www.uniprot.org/uniprot/Q55986 Q55986]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.uniprot.org/uniprot/P45062 P45062]
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* [[RXN-14115]]
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** [http://www.uniprot.org/uniprot/Q03521 Q03521]
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** Category: [[annotation]]
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** [http://www.uniprot.org/uniprot/O25235 O25235]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.uniprot.org/uniprot/Q9JSZ3 Q9JSZ3]
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* [[RXN-14124]]
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** [http://www.uniprot.org/uniprot/Q9PI72 Q9PI72]
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** Category: [[annotation]]
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** [http://www.uniprot.org/uniprot/P37585 P37585]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.uniprot.org/uniprot/P0A6W3 P0A6W3]
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* [[RXN-14126]]
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{{#set: common-name=udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine:undecaprenyl-phosphate transferase|phospho-n-acetylmuramoyl-pentapeptide- transferase}}
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** Category: [[annotation]]
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{{#set: ec-number=ec-2.7.8.13}}
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: direction=left-to-right}}
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* [[RXN-14227]]
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{{#set: nb gene associated=2}}
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** Category: [[annotation]]
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{{#set: nb pathway associated=1}}
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: reconstruction category=annotation}}
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* [[RXN-5841]]
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{{#set: reconstruction tool=pathwaytools}}
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** Category: [[annotation]]
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{{#set: reconstruction comment=n.a}}
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: reconstruction source=genome}}
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* [[RXN-7607]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-7609]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* [[XMPXAN-RXN]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[SALVADEHYPOX-PWY]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7821]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7185]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5381]]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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* [[NAD-BIOSYNTHESIS-II]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6596]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6606]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6607]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6608]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5695]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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</div>
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{{#set: common-name=sure}}
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{{#set: transcription-direction=negative}}
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{{#set: centisome-position=10.663855    }}
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{{#set: left-end-position=409773}}
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{{#set: right-end-position=410594}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=14}}
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{{#set: nb pathway associated=10}}

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS01815

  • common-name:
    • sure
  • transcription-direction:
    • negative
  • centisome-position:
    • 10.663855
  • left-end-position:
    • 409773
  • right-end-position:
    • 410594

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • SALVADEHYPOX-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7821
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-7185
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5381
    • 4 reactions found over 11 reactions in the full pathway
  • NAD-BIOSYNTHESIS-II
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6596
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-6606
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6607
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6608
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5695
    • 3 reactions found over 4 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS01815&oldid=94628"