Difference between revisions of "FSU RS13425"
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(Created page with "Category:reaction == Reaction 3.2.1.78-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.78 ec-3.2.1.78] * direction: ** left-to-right * common-name: ** mannan end...") |
(Created page with "Category:gene == Gene FSU_RS13425 == * transcription-direction: ** positive * centisome-position: ** 84.64709 * left-end-position: ** 3252991 * right-end-position: **...") |
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− | [[Category: | + | [[Category:gene]] |
− | == | + | == Gene FSU_RS13425 == |
− | * | + | * transcription-direction: |
− | ** | + | ** positive |
− | * | + | * centisome-position: |
− | ** left- | + | ** 84.64709 |
− | * | + | * left-end-position: |
− | ** | + | ** 3252991 |
− | == | + | * right-end-position: |
− | * | + | ** 3254076 |
− | == | + | == Organism(s) associated with this gene == |
− | * | + | * [[fsucgem]] |
+ | == Reaction(s) associated == | ||
+ | * [[HISTAMINOTRANS-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** | + | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a |
− | * | + | ** Category: [[orthology]] |
− | ** Category: [[ | + | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a |
− | *** | + | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a |
− | == Pathway(s) | + | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a |
− | * [[PWY- | + | *** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a |
− | ** ''' | + | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a |
− | + | * [[TYROSINE-AMINOTRANSFERASE-RXN]] | |
− | * | + | ** Category: [[orthology]] |
− | + | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | |
− | * | + | *** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a |
− | ** [ | + | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a |
− | ** [ | + | == Pathway(s) associated == |
− | ** [ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** [ | + | * [[HISTSYN-PWY]] |
− | ** [ | + | ** '''10''' reactions found over '''10''' reactions in the full pathway |
− | ** [ | + | * [[PWY-3581]] |
− | + | ** '''2''' reactions found over '''11''' reactions in the full pathway | |
− | {{#set: direction= | + | * [[TYRSYN]] |
− | {{#set: | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
− | {{#set: | + | * [[PWY-5048]] |
− | {{#set: | + | ** '''1''' reactions found over '''10''' reactions in the full pathway |
− | {{#set: | + | * [[PWY-5886]] |
− | {{#set: | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
− | {{#set: | + | * [[PWY-8016]] |
− | + | ** '''1''' reactions found over '''5''' reactions in the full pathway | |
+ | * [[PWY3O-4108]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5151]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[TYRFUMCAT-PWY]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7514]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7518]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5754]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: centisome-position=84.64709 }} | ||
+ | {{#set: left-end-position=3252991}} | ||
+ | {{#set: right-end-position=3254076}} | ||
+ | {{#set: organism associated=fsucgem}} | ||
+ | {{#set: nb reaction associated=2}} | ||
+ | {{#set: nb pathway associated=12}} |
Latest revision as of 11:21, 17 October 2022
Contents
Gene FSU_RS13425
- transcription-direction:
- positive
- centisome-position:
- 84.64709
- left-end-position:
- 3252991
- right-end-position:
- 3254076
Organism(s) associated with this gene
Reaction(s) associated
- HISTAMINOTRANS-RXN
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: orthology
- source: ecoli; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: plantarum; tool: orthofinder; comment: n.a
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- Category: annotation
- TYROSINE-AMINOTRANSFERASE-RXN
- Category: orthology
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: plantarum; tool: orthofinder; comment: n.a
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- Category: orthology
Pathway(s) associated
- HISTSYN-PWY
- 10 reactions found over 10 reactions in the full pathway
- PWY-3581
- 2 reactions found over 11 reactions in the full pathway
- TYRSYN
- 3 reactions found over 3 reactions in the full pathway
- PWY-5048
- 1 reactions found over 10 reactions in the full pathway
- PWY-5886
- 1 reactions found over 1 reactions in the full pathway
- PWY-8016
- 1 reactions found over 5 reactions in the full pathway
- PWY3O-4108
- 4 reactions found over 4 reactions in the full pathway
- PWY-5151
- 1 reactions found over 2 reactions in the full pathway
- TYRFUMCAT-PWY
- 1 reactions found over 5 reactions in the full pathway
- PWY-7514
- 1 reactions found over 3 reactions in the full pathway
- PWY-7518
- 1 reactions found over 2 reactions in the full pathway
- PWY-5754
- 1 reactions found over 5 reactions in the full pathway