Difference between revisions of "FISUC RS15245"

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(Created page with "Category:reaction == Reaction FMNREDUCT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.5.1.39 ec-1.5.1.39] * direction: ** left-to-right == Reaction formula == * 1...")
(Created page with "Category:gene == Gene FISUC_RS15245 == * common-name: ** coba * transcription-direction: ** negative * centisome-position: ** 97.1894 * left-end-position: ** 3734634 *...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction FMNREDUCT-RXN ==
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== Gene FISUC_RS15245 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/1.5.1.39 ec-1.5.1.39]
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** coba
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[FMN]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[FMNH2]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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** 97.1894   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS13015]]
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** 3734634
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** Category: [[manual]]
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* right-end-position:
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
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** 3736211
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== Pathway(s) ==
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== Organism(s) associated with this gene  ==
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* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic):
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* [[fsucgem]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reaction(s) associated ==
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* [[PWY-7723]], bacterial bioluminescence:
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* [[RXN-13403]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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** Category: [[annotation]]
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== Reconstruction information  ==
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
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* [[RXN-8675]]
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== External links  ==
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** Category: [[annotation]]
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* RHEA:
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21622 21622]
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* [[UROPORIIIMETHYLTRANSA-RXN]]
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* LIGAND-RXN:
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** Category: [[annotation]]
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** [http://www.genome.jp/dbget-bin/www_bget?R05706 R05706]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* UNIPROT:
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== Pathway(s) associated ==
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** [http://www.uniprot.org/uniprot/P0AEN1 P0AEN1]
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* [[PWY-7377]]
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{{#set: ec-number=ec-1.5.1.39}}
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** '''15''' reactions found over '''15''' reactions in the full pathway
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{{#set: direction=left-to-right}}
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* [[PWY-5194]]
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{{#set: nb gene associated=1}}
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** '''4''' reactions found over '''4''' reactions in the full pathway
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{{#set: nb pathway associated=2}}
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* [[PWY-7376]]
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{{#set: reconstruction category=manual}}
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** '''3''' reactions found over '''13''' reactions in the full pathway
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{{#set: reconstruction tool=curation}}
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* [[PWY-5196]]
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{{#set: reconstruction comment=present in the annotation part of the emile network.}}
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** '''3''' reactions found over '''7''' reactions in the full pathway
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{{#set: reconstruction source=reactions_add_147_emile_annot}}
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{{#set: common-name=coba}}
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{{#set: transcription-direction=negative}}
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{{#set: centisome-position=97.1894    }}
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{{#set: left-end-position=3734634}}
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{{#set: right-end-position=3736211}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS15245

  • common-name:
    • coba
  • transcription-direction:
    • negative
  • centisome-position:
    • 97.1894
  • left-end-position:
    • 3734634
  • right-end-position:
    • 3736211

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7377
    • 15 reactions found over 15 reactions in the full pathway
  • PWY-5194
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7376
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-5196
    • 3 reactions found over 7 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15245&oldid=94633"