Difference between revisions of "FSU RS13560"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction GLUTAMATE-DEHYDROGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.2 ec-1.4.1.2] * direction: ** left-to-right == Reaction for...")
(Created page with "Category:gene == Gene FSU_RS13560 == * common-name: ** quef * transcription-direction: ** positive * centisome-position: ** 85.547035 * left-end-position: ** 3287576 *...")
 
(13 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction GLUTAMATE-DEHYDROGENASE-RXN ==
+
== Gene FSU_RS13560 ==
−
* ec-number:
+
* common-name:
−
** [http://enzyme.expasy.org/EC/1.4.1.2 ec-1.4.1.2]
+
** quef
−
* direction:
+
* transcription-direction:
−
** left-to-right
+
** positive
−
== Reaction formula ==
+
* centisome-position:
−
* 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
** 85.547035   
−
== Gene(s) associated with this reaction  ==
+
* left-end-position:
−
* Gene: [[FSU_RS00325]]
+
** 3287576
 +
* right-end-position:
 +
** 3288052
 +
== Organism(s) associated with this gene  ==
 +
* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
* [[RXN0-4022]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
== Pathway(s) ==
+
== Pathway(s) associated ==
−
* [[PWY-5022]], 4-aminobutanoate degradation V:
+
* [[PWY-6700]]
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7126]], ethylene biosynthesis IV (engineered):
+
{{#set: common-name=quef}}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
+
{{#set: centisome-position=85.547035    }}
−
** '''1''' reactions found over '''11''' reactions in the full pathway
+
{{#set: left-end-position=3287576}}
−
* [[GLUTAMATE-DEG1-PWY]], L-glutamate degradation I:
+
{{#set: right-end-position=3288052}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: organism associated=fsucgem}}
−
* [[PWY-6728]], methylaspartate cycle:
+
{{#set: nb reaction associated=1}}
−
** '''9''' reactions found over '''19''' reactions in the full pathway
+
{{#set: nb pathway associated=1}}
−
* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
== Reconstruction information  ==
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
== External links  ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15136 15136]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00243 R00243]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P20016 P20016]
 
−
** [http://www.uniprot.org/uniprot/P28997 P28997]
 
−
** [http://www.uniprot.org/uniprot/P41755 P41755]
 
−
** [http://www.uniprot.org/uniprot/Q9JTP6 Q9JTP6]
 
−
** [http://www.uniprot.org/uniprot/P00365 P00365]
 
−
** [http://www.uniprot.org/uniprot/P93541 P93541]
 
−
** [http://www.uniprot.org/uniprot/P80319 P80319]
 
−
** [http://www.uniprot.org/uniprot/P24295 P24295]
 
−
** [http://www.uniprot.org/uniprot/P27346 P27346]
 
−
** [http://www.uniprot.org/uniprot/P33327 P33327]
 
−
** [http://www.uniprot.org/uniprot/Q43260 Q43260]
 
−
** [http://www.uniprot.org/uniprot/O04937 O04937]
 
−
** [http://www.uniprot.org/uniprot/Q25415 Q25415]
 
−
** [http://www.uniprot.org/uniprot/O74024 O74024]
 
−
** [http://www.uniprot.org/uniprot/O59650 O59650]
 
−
</div>
 
−
{{#set: ec-number=ec-1.4.1.2}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=6}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=orthofinder}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=bthetaiotaomicron}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS13560

  • common-name:
    • quef
  • transcription-direction:
    • positive
  • centisome-position:
    • 85.547035
  • left-end-position:
    • 3287576
  • right-end-position:
    • 3288052

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6700
    • 4 reactions found over 4 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS13560&oldid=94637"