Difference between revisions of "FSU RS13560"

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(Created page with "Category:reaction == Reaction RXN-13202 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16] * direction: ** left-to-right * common-name: ** carbamoyl-pho...")
(Created page with "Category:gene == Gene FSU_RS13560 == * common-name: ** quef * transcription-direction: ** positive * centisome-position: ** 85.547035 * left-end-position: ** 3287576 *...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN-13202 ==
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== Gene FSU_RS13560 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** carbamoyl-phosphate synthase large subunit
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** quef
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== Reaction formula ==
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* transcription-direction:
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* 1 [[AMMONIUM]][c] '''+''' 2 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FSU_RS00955]]
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** 85.547035   
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* left-end-position:
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** 3287576
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* right-end-position:
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** 3288052
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[RXN0-4022]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS00960]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) associated ==
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* Gene: [[FSU_RS06080]]
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* [[PWY-6700]]
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** Category: [[annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=quef}}
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* Gene: [[FISUC_RS14765]]
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{{#set: transcription-direction=positive}}
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** Category: [[annotation]]
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{{#set: centisome-position=85.547035    }}
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: left-end-position=3287576}}
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* Gene: [[FISUC_RS14770]]
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{{#set: right-end-position=3288052}}
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** Category: [[annotation]]
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{{#set: organism associated=fsucgem}}
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction associated=1}}
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* Gene: [[FISUC_RS04185]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PWY-4984]], urea cycle:
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/O15829 O15829]
 
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** [http://www.uniprot.org/uniprot/O15830 O15830]
 
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** [http://www.uniprot.org/uniprot/P07756 P07756]
 
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** [http://www.uniprot.org/uniprot/P31327 P31327]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10624 10624]
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
 
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{{#set: ec-number=ec-6.3.4.16}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=carbamoyl-phosphate synthase large subunit}}
 
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{{#set: nb gene associated=6}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS13560

  • common-name:
    • quef
  • transcription-direction:
    • positive
  • centisome-position:
    • 85.547035
  • left-end-position:
    • 3287576
  • right-end-position:
    • 3288052

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6700
    • 4 reactions found over 4 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS13560&oldid=94637"