Difference between revisions of "FSU RS12885"

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(Created page with "Category:reaction == Reaction GLU6PDEHYDROG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.49 ec-1.1.1.49] * direction: ** left-to-right == Reaction formula ==...")
(Created page with "Category:gene == Gene FSU_RS12885 == * common-name: ** nada * transcription-direction: ** negative * centisome-position: ** 81.49635 * left-end-position: ** 3131908 *...")
 
(10 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction GLU6PDEHYDROG-RXN ==
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== Gene FSU_RS12885 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/1.1.1.49 ec-1.1.1.49]
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** nada
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
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** 81.49635   
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== Gene(s) associated with this reaction ==
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* left-end-position:
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== Pathway(s) ==
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** 3131908
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* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I:
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* right-end-position:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** 3132921
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* [[P122-PWY]], heterolactic fermentation:
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== Organism(s) associated with this gene ==
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** '''17''' reactions found over '''18''' reactions in the full pathway
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* [[fsucgem]]
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* [[RUMP-PWY]], formaldehyde oxidation I:
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== Reaction(s) associated ==
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[QUINOLINATE-SYNTHA-RXN]]
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* [[PWY-8004]], Entner-Doudoroff pathway I:
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** Category: [[annotation]]
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** '''8''' reactions found over '''7''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and the Entner-Doudoroff pathway:
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** Category: [[orthology]]
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** '''4''' reactions found over '''2''' reactions in the full pathway
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast):
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Pathway(s) associated ==
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== Reconstruction information  ==
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* [[PWY-7342]]
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* category: [[manual]]; source: [[reactions_add_ibrahim_26082020]]; tool: [[curation]]; comment: added to improve flux in sugars
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** '''3''' reactions found over '''9''' reactions in the full pathway
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== External links  ==
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* [[PWY-5316]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* RHEA:
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* [[PYRIDNUCSYN-PWY]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15842 15842]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* LIGAND-RXN:
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{{#set: common-name=nada}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02736 R02736]
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{{#set: transcription-direction=negative}}
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* UNIPROT:
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{{#set: centisome-position=81.49635    }}
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** [http://www.uniprot.org/uniprot/P11411 P11411]
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{{#set: left-end-position=3131908}}
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** [http://www.uniprot.org/uniprot/P12646 P12646]
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{{#set: right-end-position=3132921}}
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** [http://www.uniprot.org/uniprot/Q00612 Q00612]
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{{#set: organism associated=fsucgem}}
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** [http://www.uniprot.org/uniprot/P54996 P54996]
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{{#set: nb reaction associated=1}}
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** [http://www.uniprot.org/uniprot/P21907 P21907]
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{{#set: nb pathway associated=3}}
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** [http://www.uniprot.org/uniprot/P54547 P54547]
 
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** [http://www.uniprot.org/uniprot/O51581 O51581]
 
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** [http://www.uniprot.org/uniprot/P0AC53 P0AC53]
 
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** [http://www.uniprot.org/uniprot/P11413 P11413]
 
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** [http://www.uniprot.org/uniprot/P29686 P29686]
 
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** [http://www.uniprot.org/uniprot/P44311 P44311]
 
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** [http://www.uniprot.org/uniprot/P56110 P56110]
 
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** [http://www.uniprot.org/uniprot/Q9JTW0 Q9JTW0]
 
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** [http://www.uniprot.org/uniprot/O25730 O25730]
 
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** [http://www.uniprot.org/uniprot/O51240 O51240]
 
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** [http://www.uniprot.org/uniprot/O66787 O66787]
 
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** [http://www.uniprot.org/uniprot/P05370 P05370]
 
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** [http://www.uniprot.org/uniprot/P11410 P11410]
 
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** [http://www.uniprot.org/uniprot/P11412 P11412]
 
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** [http://www.uniprot.org/uniprot/Q9R5T2 Q9R5T2]
 
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** [http://www.uniprot.org/uniprot/P48828 P48828]
 
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** [http://www.uniprot.org/uniprot/P37986 P37986]
 
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** [http://www.uniprot.org/uniprot/Q8IKU0 Q8IKU0]
 
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** [http://www.uniprot.org/uniprot/Q27741 Q27741]
 
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** [http://www.uniprot.org/uniprot/P48826 P48826]
 
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** [http://www.uniprot.org/uniprot/Q42919 Q42919]
 
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** [http://www.uniprot.org/uniprot/P37830 P37830]
 
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** [http://www.uniprot.org/uniprot/Q9FY99 Q9FY99]
 
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** [http://www.uniprot.org/uniprot/Q49700 Q49700]
 
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** [http://www.uniprot.org/uniprot/P73411 P73411]
 
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** [http://www.uniprot.org/uniprot/Q8L743 Q8L743]
 
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** [http://www.uniprot.org/uniprot/Q43793 Q43793]
 
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** [http://www.uniprot.org/uniprot/O65856 O65856]
 
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** [http://www.uniprot.org/uniprot/Q43839 Q43839]
 
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** [http://www.uniprot.org/uniprot/O81978 O81978]
 
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** [http://www.uniprot.org/uniprot/O24357 O24357]
 
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** [http://www.uniprot.org/uniprot/O24358 O24358]
 
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** [http://www.uniprot.org/uniprot/O24359 O24359]
 
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** [http://www.uniprot.org/uniprot/O22404 O22404]
 
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** [http://www.uniprot.org/uniprot/O22405 O22405]
 
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** [http://www.uniprot.org/uniprot/O22406 O22406]
 
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** [http://www.uniprot.org/uniprot/Q9FJI5 Q9FJI5]
 
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** [http://www.uniprot.org/uniprot/Q9LK23 Q9LK23]
 
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</div>
 
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{{#set: ec-number=ec-1.1.1.49}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: nb gene associated=0}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=manual}}
 
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{{#set: reconstruction tool=curation}}
 
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{{#set: reconstruction comment=added to improve flux in sugars}}
 
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{{#set: reconstruction source=reactions_add_ibrahim_26082020}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS12885

  • common-name:
    • nada
  • transcription-direction:
    • negative
  • centisome-position:
    • 81.49635
  • left-end-position:
    • 3131908
  • right-end-position:
    • 3132921

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7342
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5316
    • 2 reactions found over 9 reactions in the full pathway
  • PYRIDNUCSYN-PWY
    • 5 reactions found over 6 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS12885&oldid=94655"