Difference between revisions of "FSU RS08125"

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(Created page with "Category:reaction == Reaction RXN0-5240 == * direction: ** reversible == Reaction formula == * 1 D-ALANINE[c] '''+''' 1 PYRIDOXAL_PHOSPHATE[c] '''<=>''' 1 PYRIDO...")
(Created page with "Category:gene == Gene FSU_RS08125 == * transcription-direction: ** positive * centisome-position: ** 51.766586 * left-end-position: ** 1989392 * right-end-position: **...")
 
(10 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN0-5240 ==
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== Gene FSU_RS08125 ==
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* direction:
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* transcription-direction:
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** reversible
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** positive
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== Reaction formula ==
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* centisome-position:
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* 1 [[D-ALANINE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''<=>''' 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[PYRUVATE]][c]
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** 51.766586   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS14455]]
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** 1989392
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** Category: [[orthology]]
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* right-end-position:
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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** 1992784
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== Pathway(s)  ==
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== Organism(s) associated with this gene  ==
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== Reconstruction information  ==
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* [[fsucgem]]
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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== Reaction(s) associated ==
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* RHEA:
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* [[2.4.1.129-RXN]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28565 28565]
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** Category: [[annotation]]
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* LIGAND-RXN:
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.genome.jp/dbget-bin/www_bget?R01147 R01147]
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* [[RXN-11291]]
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{{#set: direction=reversible}}
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** Category: [[annotation]]
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{{#set: nb gene associated=1}}
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb pathway associated=0}}
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* [[RXN-11301]]
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{{#set: reconstruction category=orthology}}
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** Category: [[annotation]]
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{{#set: reconstruction tool=orthofinder}}
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: reconstruction comment=n.a}}
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* [[RXN-11348]]
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{{#set: reconstruction source=ecoli}}
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11350]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14712]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15521]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-16650]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6385]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5265]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6470]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6471]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY0-1586]]
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** '''4''' reactions found over '''12''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: centisome-position=51.766586    }}
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{{#set: left-end-position=1989392}}
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{{#set: right-end-position=1992784}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=8}}
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{{#set: nb pathway associated=5}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS08125

  • transcription-direction:
    • positive
  • centisome-position:
    • 51.766586
  • left-end-position:
    • 1989392
  • right-end-position:
    • 1992784

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6385
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-5265
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6470
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-6471
    • 6 reactions found over 6 reactions in the full pathway
  • PWY0-1586
    • 4 reactions found over 12 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS08125&oldid=94661"