Difference between revisions of "FSU RS14875"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction XANTHOSINEPHOSPHORY-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1] * direction: ** left-to-right == Reaction formula...")
(Created page with "Category:gene == Gene FSU_RS14875 == * transcription-direction: ** negative * centisome-position: ** 93.98783 * left-end-position: ** 3611956 * right-end-position: **...")
 
(7 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction XANTHOSINEPHOSPHORY-RXN ==
+
== Gene FSU_RS14875 ==
−
* ec-number:
+
* transcription-direction:
−
** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1]
+
** negative
−
* direction:
+
* centisome-position:
−
** left-to-right
+
** 93.98783   
−
== Reaction formula ==
+
* left-end-position:
−
* 1 [[Pi]][c] '''+''' 1 [[XANTHOSINE]][c] '''=>''' 1 [[RIBOSE-1P]][c] '''+''' 1 [[XANTHINE]][c]
+
** 3611956
−
== Gene(s) associated with this reaction  ==
+
* right-end-position:
−
== Pathway(s)  ==
+
** 3613065
−
* [[SALVPURINE2-PWY]], xanthine and xanthosine salvage:
+
== Organism(s) associated with this gene  ==
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[fsucgem]]
−
* [[PWY0-1296]], purine ribonucleosides degradation:
+
== Reaction(s) associated ==
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
* [[HISTAMINOTRANS-RXN]]
−
* [[PWY-5695]], inosine 5'-phosphate degradation:
+
** Category: [[annotation]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
== Reconstruction information  ==
+
** Category: [[orthology]]
−
* category: [[manual]]; source: [[reactions_add_ibrahim_18092020]]; tool: [[curation]]; comment: to improve flux
+
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
== External links  ==
+
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
−
* RHEA:
+
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27639 27639]
+
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
−
* LIGAND-RXN:
+
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
−
** [http://www.genome.jp/dbget-bin/www_bget?R02297 R02297]
+
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
−
{{#set: ec-number=ec-2.4.2.1}}
+
** Category: [[orthology]]
−
{{#set: direction=left-to-right}}
+
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
−
{{#set: nb gene associated=0}}
+
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
−
{{#set: nb pathway associated=3}}
+
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
−
{{#set: reconstruction category=manual}}
+
== Pathway(s) associated ==
−
{{#set: reconstruction tool=curation}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: reconstruction comment=to improve flux}}
+
* [[HISTSYN-PWY]]
−
{{#set: reconstruction source=reactions_add_ibrahim_18092020}}
+
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-3581]]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[TYRSYN]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5048]]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5886]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-8016]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY3O-4108]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5151]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[TYRFUMCAT-PWY]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7514]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7518]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5754]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: centisome-position=93.98783    }}
 +
{{#set: left-end-position=3611956}}
 +
{{#set: right-end-position=3613065}}
 +
{{#set: organism associated=fsucgem}}
 +
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=12}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS14875

  • transcription-direction:
    • negative
  • centisome-position:
    • 93.98783
  • left-end-position:
    • 3611956
  • right-end-position:
    • 3613065

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • HISTSYN-PWY
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-3581
    • 2 reactions found over 11 reactions in the full pathway
  • TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5048
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-5886
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-8016
    • 1 reactions found over 5 reactions in the full pathway
  • PWY3O-4108
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5151
    • 1 reactions found over 2 reactions in the full pathway
  • TYRFUMCAT-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7514
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7518
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5754
    • 1 reactions found over 5 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS14875&oldid=94664"