Difference between revisions of "FSU RS03665"

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(Created page with "Category:reaction == Reaction GLYCOGENSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.21 ec-2.4.1.21] * direction: ** reversible * common-name: ** starch syn...")
(Created page with "Category:gene == Gene FSU_RS03665 == * transcription-direction: ** negative * centisome-position: ** 22.026806 * left-end-position: ** 846491 * right-end-position: **...")
 
(9 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction GLYCOGENSYN-RXN ==
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== Gene FSU_RS03665 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/2.4.1.21 ec-2.4.1.21]
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** negative
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* direction:
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* centisome-position:
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** reversible
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** 22.026806   
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* common-name:
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* left-end-position:
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** starch synthase
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** 846491
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== Reaction formula ==
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* right-end-position:
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* 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[ADP-D-GLUCOSE]][c] '''<=>''' 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[ADP]][c]
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** 848104
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FISUC_RS15965]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[PHOSMANMUT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS16140]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[PWY-7586]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Pathway(s)  ==
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* [[PWY-5659]]
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* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose):
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-622]], starch biosynthesis:
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* [[PWY-7456]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[PWY-882]]
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''3''' reactions found over '''8''' reactions in the full pathway
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== External links  ==
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{{#set: transcription-direction=negative}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: centisome-position=22.026806    }}
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* RHEA:
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{{#set: left-end-position=846491}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18192 18192]
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{{#set: right-end-position=848104}}
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* LIGAND-RXN:
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{{#set: organism associated=fsucgem}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02421 R02421]
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{{#set: nb reaction associated=1}}
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* UNIPROT:
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{{#set: nb pathway associated=4}}
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** [http://www.uniprot.org/uniprot/P45179 P45179]
 
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** [http://www.uniprot.org/uniprot/Q40739 Q40739]
 
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** [http://www.uniprot.org/uniprot/P39125 P39125]
 
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** [http://www.uniprot.org/uniprot/Q43784 Q43784]
 
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** [http://www.uniprot.org/uniprot/P72623 P72623]
 
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** [http://www.uniprot.org/uniprot/P0A6U8 P0A6U8]
 
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** [http://www.uniprot.org/uniprot/O48899 O48899]
 
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** [http://www.uniprot.org/uniprot/O48900 O48900]
 
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** [http://www.uniprot.org/uniprot/O49064 O49064]
 
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** [http://www.uniprot.org/uniprot/Q43654 Q43654]
 
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** [http://www.uniprot.org/uniprot/P93568 P93568]
 
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** [http://www.uniprot.org/uniprot/O48515 O48515]
 
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** [http://www.uniprot.org/uniprot/O48516 O48516]
 
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** [http://www.uniprot.org/uniprot/O64925 O64925]
 
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** [http://www.uniprot.org/uniprot/Q42857 Q42857]
 
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** [http://www.uniprot.org/uniprot/Q00775 Q00775]
 
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</div>
 
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{{#set: ec-number=ec-2.4.1.21}}
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=starch synthase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS03665

  • transcription-direction:
    • negative
  • centisome-position:
    • 22.026806
  • left-end-position:
    • 846491
  • right-end-position:
    • 848104

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7586
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5659
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7456
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-882
    • 3 reactions found over 8 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS03665&oldid=94667"