Difference between revisions of "FISUC RS12065"

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(Created page with "Category:reaction == Reaction SPONTPRO-RXN == * direction: ** reversible == Reaction formula == * 1 L-DELTA1-PYRROLINE_5-CARBOXYLATE[c] '''+''' 1 PROTON[c] '''+'''...")
(Created page with "Category:gene == Gene FISUC_RS12065 == * transcription-direction: ** negative * centisome-position: ** 77.267265 * left-end-position: ** 2969099 * right-end-position:...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction SPONTPRO-RXN ==
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== Gene FISUC_RS12065 ==
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* direction:
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* transcription-direction:
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** reversible
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
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** 77.267265   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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== Pathway(s)  ==
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** 2969099
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* right-end-position:
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* [[PWY-4981]], L-proline biosynthesis II (from arginine):
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** 2970502
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Organism(s) associated with this gene  ==
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* [[PROSYN-PWY]], L-proline biosynthesis I:
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* [[fsucgem]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reaction(s) associated ==
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway):
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* [[RXN0-6366]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction):
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** '''3''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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* [[PROUT-PWY]], L-proline degradation:
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{{#set: centisome-position=77.267265    }}
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: left-end-position=2969099}}
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* [[PWY-7770]], indolmycin biosynthesis:
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{{#set: right-end-position=2970502}}
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** '''2''' reactions found over '''10''' reactions in the full pathway
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{{#set: organism associated=fsucgem}}
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* [[PWY-6853]], ethylene biosynthesis II (microbes):
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{{#set: nb reaction associated=1}}
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis:
 
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** '''7''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-3341]], L-proline biosynthesis III:
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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</div>
 
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== Reconstruction information  ==
 
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* category: [[manual]]; source: [[reactions_cmp_emile]]; tool: [[curation]]; comment: present in the annotation part without gene of the emile network.
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28237 28237]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03314 R03314]
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=0}}
 
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{{#set: nb pathway associated=10}}
 
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{{#set: reconstruction category=manual}}
 
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{{#set: reconstruction tool=curation}}
 
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{{#set: reconstruction comment=present in the annotation part without gene of the emile network.}}
 
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{{#set: reconstruction source=reactions_cmp_emile}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS12065

  • transcription-direction:
    • negative
  • centisome-position:
    • 77.267265
  • left-end-position:
    • 2969099
  • right-end-position:
    • 2970502

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS12065&oldid=94674"