Difference between revisions of "FSU RS04105"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-8768 == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.99.60 ec-5.4.99.60] * direction: ** left-to-right == Reaction formula == * 1 C...")
(Created page with "Category:gene == Gene FSU_RS04105 == * transcription-direction: ** positive * centisome-position: ** 25.091621 * left-end-position: ** 964272 * right-end-position: **...")
 
(3 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction RXN-8768 ==
+
== Gene FSU_RS04105 ==
−
* ec-number:
+
* transcription-direction:
−
** [http://enzyme.expasy.org/EC/5.4.99.60 ec-5.4.99.60]
+
** positive
−
* direction:
+
* centisome-position:
−
** left-to-right
+
** 25.091621   
−
== Reaction formula ==
+
* left-end-position:
−
* 1 [[CPD-9045]][c] '''=>''' 1 [[CPD-9049]][c] '''+''' 1 [[PROTON]][c]
+
** 964272
−
== Gene(s) associated with this reaction  ==
+
* right-end-position:
−
== Pathway(s)  ==
+
** 965393
−
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
+
== Organism(s) associated with this gene  ==
−
** '''15''' reactions found over '''15''' reactions in the full pathway
+
* [[fsucgem]]
−
== Reconstruction information  ==
+
== Reaction(s) associated ==
−
* category: [[manual]]; source: [[reactions_add_adenosylcobalamin]]; tool: [[curation]]; comment: added to reach cpd-691
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
== External links  ==
+
* [[RXN-12587]]
−
* RHEA:
+
** Category: [[annotation]]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16210 16210]
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* LIGAND-RXN:
+
* [[RXN-12588]]
−
** [http://www.genome.jp/dbget-bin/www_bget?R05814 R05814]
+
** Category: [[annotation]]
−
{{#set: ec-number=ec-5.4.99.60}}
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: direction=left-to-right}}
+
* [[RXN-12621]]
−
{{#set: nb gene associated=0}}
+
** Category: [[annotation]]
−
{{#set: nb pathway associated=1}}
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: reconstruction category=manual}}
+
* [[RXN-14382]]
−
{{#set: reconstruction tool=curation}}
+
** Category: [[annotation]]
−
{{#set: reconstruction comment=added to reach cpd-691}}
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: reconstruction source=reactions_add_adenosylcobalamin}}
+
* [[RXN-14384]]
 +
** Category: [[manual]]
 +
*** source: [[add_expert_reactions]]; tool: [[unknown-tool]]; comment: added to improve flux in sugars
 +
* [[RXN-14385]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14386]]
 +
** Category: [[manual]]
 +
*** source: [[add_expert_reactions]]; tool: [[unknown-tool]]; comment: added to improve flux in sugars
 +
* [[RXN-15881]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-20037]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9787]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-308]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6891]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6892]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7250]]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7892]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7891]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7904]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7889]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7888]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6823]]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY0-1021]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: centisome-position=25.091621    }}
 +
{{#set: left-end-position=964272}}
 +
{{#set: right-end-position=965393}}
 +
{{#set: organism associated=fsucgem}}
 +
{{#set: nb reaction associated=11}}
 +
{{#set: nb pathway associated=10}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS04105

  • transcription-direction:
    • positive
  • centisome-position:
    • 25.091621
  • left-end-position:
    • 964272
  • right-end-position:
    • 965393

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6891
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7250
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-7892
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7891
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7904
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7889
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7888
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6823
    • 1 reactions found over 8 reactions in the full pathway
  • PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS04105&oldid=94677"