Difference between revisions of "FSU RS15215"

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(Created page with "Category:reaction == Reaction RXN-16654 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] * direction: ** left-to-right == Reaction formula == * 1 CPD-...")
(Created page with "Category:gene == Gene FSU_RS15215 == * common-name: ** lyss * transcription-direction: ** positive * centisome-position: ** 96.69787 * left-end-position: ** 3716103 *...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction RXN-16654 ==
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== Gene FSU_RS15215 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
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** lyss
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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== Reaction formula ==
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* centisome-position:
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* 1 [[CPD-7880]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DODECANOATE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
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** 96.69787   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS01755]]
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** 3716103
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** Category: [[manual]]
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* right-end-position:
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
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** 3717608
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== Pathway(s)  ==
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== Organism(s) associated with this gene  ==
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== Reconstruction information  ==
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* [[fsucgem]]
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* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
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== Reaction(s) associated ==
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== External links  ==
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* [[LYSINE--TRNA-LIGASE-RXN]]
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{{#set: ec-number=ec-1.2.1.3}}
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** Category: [[annotation]]
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{{#set: direction=left-to-right}}
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb gene associated=1}}
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* [[RXN0-5208]]
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{{#set: nb pathway associated=0}}
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** Category: [[orthology]]
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{{#set: reconstruction category=manual}}
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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{{#set: reconstruction tool=curation}}
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== Pathway(s) associated ==
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{{#set: reconstruction comment=present in the annotation part of the emile network.}}
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* [[TRNA-CHARGING-PWY]]
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{{#set: reconstruction source=reactions_add_147_emile_annot}}
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** '''21''' reactions found over '''21''' reactions in the full pathway
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{{#set: common-name=lyss}}
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{{#set: transcription-direction=positive}}
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{{#set: centisome-position=96.69787    }}
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{{#set: left-end-position=3716103}}
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{{#set: right-end-position=3717608}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=1}}

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS15215

  • common-name:
    • lyss
  • transcription-direction:
    • positive
  • centisome-position:
    • 96.69787
  • left-end-position:
    • 3716103
  • right-end-position:
    • 3717608

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS15215&oldid=94679"