Difference between revisions of "FISUC RS08325"

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(Created page with "Category:reaction == Reaction 3.2.1.78-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.78 ec-3.2.1.78] * direction: ** left-to-right * common-name: ** mannan end...")
(Created page with "Category:gene == Gene FISUC_RS08325 == * transcription-direction: ** negative * centisome-position: ** 53.148895 * left-end-position: ** 2042318 * right-end-position:...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction 3.2.1.78-RXN ==
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== Gene FISUC_RS08325 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/3.2.1.78 ec-3.2.1.78]
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** negative
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* direction:
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* centisome-position:
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** left-to-right
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** 53.148895   
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* common-name:
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* left-end-position:
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** mannan endo-1,4-beta-mannosidase
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** 2042318
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== Reaction formula ==
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* right-end-position:
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* 1 [[1-4-Mannan]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[Short-Mannan]][c]
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** 2042899
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FISUC_RS08440]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[GUANPRIBOSYLTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS10375]]
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* [[HYPOXANPRIBOSYLTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) ==
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* [[XANPRIBOSYLTRAN-RXN]]
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* [[PWY-7456]], β-(1,4)-mannan degradation:
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** Category: [[annotation]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Reconstruction information  ==
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== Pathway(s) associated ==
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-6620]]
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== External links  ==
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* UNIPROT:
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* [[PWY-6599]]
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** [http://www.uniprot.org/uniprot/P16699 P16699]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P22533 P22533]
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* [[PWY-6609]]
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** [http://www.uniprot.org/uniprot/O66185 O66185]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/O48540 O48540]
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* [[PWY-6610]]
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** [http://www.uniprot.org/uniprot/Q9M0H6 Q9M0H6]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P49425 P49425]
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* [[SALVPURINE2-PWY]]
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{{#set: ec-number=ec-3.2.1.78}}
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** '''2''' reactions found over '''2''' reactions in the full pathway
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{{#set: direction=left-to-right}}
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{{#set: transcription-direction=negative}}
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{{#set: common-name=mannan endo-1,4-beta-mannosidase}}
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{{#set: centisome-position=53.148895    }}
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{{#set: nb gene associated=2}}
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{{#set: left-end-position=2042318}}
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{{#set: nb pathway associated=1}}
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{{#set: right-end-position=2042899}}
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{{#set: reconstruction category=annotation}}
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{{#set: organism associated=fsucgem}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: nb reaction associated=3}}
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{{#set: reconstruction comment=n.a}}
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{{#set: nb pathway associated=5}}
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS08325

  • transcription-direction:
    • negative
  • centisome-position:
    • 53.148895
  • left-end-position:
    • 2042318
  • right-end-position:
    • 2042899

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6620
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6599
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6609
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6610
    • 2 reactions found over 3 reactions in the full pathway
  • SALVPURINE2-PWY
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS08325&oldid=94682"