Difference between revisions of "FISUC RS08325"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction ATPSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/7.1.2.2 ec-7.1.2.2] * direction: ** reversible * common-name: ** atpase ** v-type...")
(Created page with "Category:gene == Gene FISUC_RS08325 == * transcription-direction: ** negative * centisome-position: ** 53.148895 * left-end-position: ** 2042318 * right-end-position:...")
 
(4 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction ATPSYN-RXN ==
+
== Gene FISUC_RS08325 ==
−
* ec-number:
+
* transcription-direction:
−
** [http://enzyme.expasy.org/EC/7.1.2.2 ec-7.1.2.2]
+
** negative
−
* direction:
+
* centisome-position:
−
** reversible
+
** 53.148895   
−
* common-name:
+
* left-end-position:
−
** atpase
+
** 2042318
−
** v-type atp synthase subunit b
+
* right-end-position:
−
** v-type atp synthase subunit d
+
** 2042899
−
** atp synthase subunit k
+
== Organism(s) associated with this gene  ==
−
** v-type atp synthase subunit a
+
* [[fsucgem]]
−
== Reaction formula ==
+
== Reaction(s) associated ==
−
* 1 [[ATP]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ADP]][c] '''+''' 4 [[PROTON]][e] '''+''' 1 [[Pi]][c]
+
* [[GUANPRIBOSYLTRAN-RXN]]
−
== Gene(s) associated with this reaction  ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* Gene: [[FSU_RS00470]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
−
* Gene: [[FSU_RS00465]]
+
* [[HYPOXANPRIBOSYLTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
−
* Gene: [[FSU_RS00460]]
+
* [[XANPRIBOSYLTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
−
* Gene: [[FSU_RS00445]]
+
== Pathway(s) associated ==
−
** Category: [[annotation]]
+
* [[PWY-6620]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* Gene: [[FISUC_RS14290]]
+
* [[PWY-6599]]
−
** Category: [[annotation]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[PWY-6609]]
−
* Gene: [[FISUC_RS14280]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** Category: [[annotation]]
+
* [[PWY-6610]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* Gene: [[FISUC_RS14275]]
+
* [[SALVPURINE2-PWY]]
−
** Category: [[annotation]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
{{#set: transcription-direction=negative}}
−
* Gene: [[FISUC_RS14270]]
+
{{#set: centisome-position=53.148895    }}
−
** Category: [[annotation]]
+
{{#set: left-end-position=2042318}}
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
{{#set: right-end-position=2042899}}
−
* Gene: [[FISUC_RS14255]]
+
{{#set: organism associated=fsucgem}}
−
** Category: [[annotation]]
+
{{#set: nb reaction associated=3}}
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
{{#set: nb pathway associated=5}}
−
* Gene: [[FISUC_RS07455]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS14285]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FISUC_RS14265]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS09380]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FSU_RS00475]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS00455]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS00480]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
−
== Pathway(s)  ==
 
−
* [[PWY-7980]], ATP biosynthesis:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
== Reconstruction information  ==
 
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== External links  ==
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00086 R00086]
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20855 20855]
 
−
{{#set: ec-number=ec-7.1.2.2}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=v-type atp synthase subunit d|atp synthase subunit k|v-type atp synthase subunit a|atpase|v-type atp synthase subunit b}}
 
−
{{#set: nb gene associated=16}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS08325

  • transcription-direction:
    • negative
  • centisome-position:
    • 53.148895
  • left-end-position:
    • 2042318
  • right-end-position:
    • 2042899

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6620
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6599
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6609
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6610
    • 2 reactions found over 3 reactions in the full pathway
  • SALVPURINE2-PWY
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS08325&oldid=94682"