Difference between revisions of "FSU RS01445"

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(Created page with "Category:reaction == Reaction R10-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.43 ec-4.1.2.43] * direction: ** reversible == Reaction formula == * 1 [[CPD-26]...")
(Created page with "Category:gene == Gene FSU_RS01445 == * common-name: ** hemc * transcription-direction: ** negative * centisome-position: ** 8.869832 * left-end-position: ** 340868 * r...")
 
(12 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction R10-RXN ==
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== Gene FSU_RS01445 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/4.1.2.43 ec-4.1.2.43]
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** hemc
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* direction:
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* transcription-direction:
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** reversible
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[CPD-26]][c] '''<=>''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[RIBULOSE-5P]][c]
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** 8.869832   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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== Pathway(s)  ==
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** 340868
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* [[PWY-7796]], pentose phosphate pathway (oxidative branch) II:
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* right-end-position:
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** 341923
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* [[RUMP-PWY]], formaldehyde oxidation I:
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[OHMETHYLBILANESYN-RXN]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-5189]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5188]]
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
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{{#set: common-name=hemc}}
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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== Reconstruction information  ==
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{{#set: centisome-position=8.869832    }}
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* category: [[manual]]; source: [[reactions_add_ibrahim_26082020]]; tool: [[curation]]; comment: added to improve flux in sugars
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{{#set: left-end-position=340868}}
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== External links  ==
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{{#set: right-end-position=341923}}
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* RHEA:
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{{#set: organism associated=fsucgem}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25204 25204]
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{{#set: nb reaction associated=1}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05338 R05338]
 
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{{#set: ec-number=ec-4.1.2.43}}
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=0}}
 
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{{#set: nb pathway associated=3}}
 
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{{#set: reconstruction category=manual}}
 
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{{#set: reconstruction tool=curation}}
 
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{{#set: reconstruction comment=added to improve flux in sugars}}
 
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{{#set: reconstruction source=reactions_add_ibrahim_26082020}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS01445

  • common-name:
    • hemc
  • transcription-direction:
    • negative
  • centisome-position:
    • 8.869832
  • left-end-position:
    • 340868
  • right-end-position:
    • 341923

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5189
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5188
    • 6 reactions found over 6 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS01445&oldid=94692"