Difference between revisions of "FSU RS01445"

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(Created page with "Category:reaction == Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2.9 ec-2.1.2.9] * direction: ** left-to-right * comm...")
(Created page with "Category:gene == Gene FSU_RS01445 == * common-name: ** hemc * transcription-direction: ** negative * centisome-position: ** 8.869832 * left-end-position: ** 340868 * r...")
 
(11 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN ==
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== Gene FSU_RS01445 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.1.2.9 ec-2.1.2.9]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** methionyl-trna formyltransferase
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** hemc
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== Reaction formula ==
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* transcription-direction:
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* 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[L-methionyl-tRNAfmet]][c] '''=>''' 1 [[N-formyl-L-methionyl-tRNAfmet]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c]
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** negative
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FSU_RS13195]]
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** 8.869832   
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* left-end-position:
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** 340868
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* right-end-position:
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** 341923
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[OHMETHYLBILANESYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS11230]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) associated ==
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== Pathway(s)  ==
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* [[PWY-5189]]
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== Reconstruction information  ==
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-5188]]
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== External links  ==
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* RHEA:
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{{#set: common-name=hemc}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24381 24381]
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{{#set: transcription-direction=negative}}
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* LIGAND-RXN:
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{{#set: centisome-position=8.869832    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03940 R03940]
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{{#set: left-end-position=340868}}
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* UNIPROT:
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{{#set: right-end-position=341923}}
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** [http://www.uniprot.org/uniprot/P94463 P94463]
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{{#set: organism associated=fsucgem}}
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** [http://www.uniprot.org/uniprot/Q9PJ28 Q9PJ28]
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{{#set: nb reaction associated=1}}
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** [http://www.uniprot.org/uniprot/P50932 P50932]
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{{#set: nb pathway associated=2}}
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** [http://www.uniprot.org/uniprot/P47605 P47605]
 
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** [http://www.uniprot.org/uniprot/P44787 P44787]
 
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** [http://www.uniprot.org/uniprot/P56461 P56461]
 
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** [http://www.uniprot.org/uniprot/Q9CEE9 Q9CEE9]
 
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** [http://www.uniprot.org/uniprot/O51091 O51091]
 
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** [http://www.uniprot.org/uniprot/Q9JWY9 Q9JWY9]
 
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** [http://www.uniprot.org/uniprot/P23882 P23882]
 
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** [http://www.uniprot.org/uniprot/P32785 P32785]
 
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** [http://www.uniprot.org/uniprot/P75235 P75235]
 
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** [http://www.uniprot.org/uniprot/Q55163 Q55163]
 
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{{#set: ec-number=ec-2.1.2.9}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=methionyl-trna formyltransferase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=0}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS01445

  • common-name:
    • hemc
  • transcription-direction:
    • negative
  • centisome-position:
    • 8.869832
  • left-end-position:
    • 340868
  • right-end-position:
    • 341923

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5189
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5188
    • 6 reactions found over 6 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS01445&oldid=94692"