Difference between revisions of "FSU RS01445"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-5240 == * direction: ** reversible == Reaction formula == * 1 D-ALANINE[c] '''+''' 1 PYRIDOXAL_PHOSPHATE[c] '''<=>''' 1 PYRIDO...")
(Created page with "Category:gene == Gene FSU_RS01445 == * common-name: ** hemc * transcription-direction: ** negative * centisome-position: ** 8.869832 * left-end-position: ** 340868 * r...")
 
(9 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction RXN0-5240 ==
+
== Gene FSU_RS01445 ==
−
* direction:
+
* common-name:
−
** reversible
+
** hemc
−
== Reaction formula ==
+
* transcription-direction:
−
* 1 [[D-ALANINE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''<=>''' 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[PYRUVATE]][c]
+
** negative
−
== Gene(s) associated with this reaction  ==
+
* centisome-position:
−
* Gene: [[FSU_RS14455]]
+
** 8.869832   
 +
* left-end-position:
 +
** 340868
 +
* right-end-position:
 +
** 341923
 +
== Organism(s) associated with this gene  ==
 +
* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
* [[OHMETHYLBILANESYN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
== Pathway(s) ==
+
== Pathway(s) associated ==
−
== Reconstruction information  ==
+
* [[PWY-5189]]
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
== External links  ==
+
* [[PWY-5188]]
−
* RHEA:
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28565 28565]
+
{{#set: common-name=hemc}}
−
* LIGAND-RXN:
+
{{#set: transcription-direction=negative}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01147 R01147]
+
{{#set: centisome-position=8.869832    }}
−
{{#set: direction=reversible}}
+
{{#set: left-end-position=340868}}
−
{{#set: nb gene associated=1}}
+
{{#set: right-end-position=341923}}
−
{{#set: nb pathway associated=0}}
+
{{#set: organism associated=fsucgem}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb reaction associated=1}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=ecoli}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS01445

  • common-name:
    • hemc
  • transcription-direction:
    • negative
  • centisome-position:
    • 8.869832
  • left-end-position:
    • 340868
  • right-end-position:
    • 341923

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5189
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5188
    • 6 reactions found over 6 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS01445&oldid=94692"