Difference between revisions of "FSU RS01445"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction ASPARTATE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.12 ec-6.1.1.12] * direction: ** left-to-right * common-name:...")
(Created page with "Category:gene == Gene FSU_RS01445 == * common-name: ** hemc * transcription-direction: ** negative * centisome-position: ** 8.869832 * left-end-position: ** 340868 * r...")
 
(4 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction ASPARTATE--TRNA-LIGASE-RXN ==
+
== Gene FSU_RS01445 ==
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/6.1.1.12 ec-6.1.1.12]
 
−
* direction:
 
−
** left-to-right
 
 
* common-name:
 
* common-name:
−
** aspartate--trna ligase
+
** hemc
−
== Reaction formula ==
+
* transcription-direction:
−
* 1 [[ASP-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASP-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
** negative
−
== Gene(s) associated with this reaction  ==
+
* centisome-position:
−
* Gene: [[FSU_RS00430]]
+
** 8.869832   
 +
* left-end-position:
 +
** 340868
 +
* right-end-position:
 +
** 341923
 +
== Organism(s) associated with this gene  ==
 +
* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
* [[OHMETHYLBILANESYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* Gene: [[FISUC_RS14240]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
== Pathway(s) associated ==
−
== Pathway(s) ==
+
* [[PWY-5189]]
−
* [[TRNA-CHARGING-PWY]], tRNA charging:
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
* [[PWY-5188]]
−
== Reconstruction information  ==
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: common-name=hemc}}
−
== External links  ==
+
{{#set: transcription-direction=negative}}
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: centisome-position=8.869832    }}
−
* RHEA:
+
{{#set: left-end-position=340868}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19650 19650]
+
{{#set: right-end-position=341923}}
−
* LIGAND-RXN:
+
{{#set: organism associated=fsucgem}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05577 R05577]
+
{{#set: nb reaction associated=1}}
−
* UNIPROT:
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/P56459 P56459]
 
−
** [http://www.uniprot.org/uniprot/O26328 O26328]
 
−
** [http://www.uniprot.org/uniprot/O83950 O83950]
 
−
** [http://www.uniprot.org/uniprot/Q58950 Q58950]
 
−
** [http://www.uniprot.org/uniprot/Q9ZLL9 Q9ZLL9]
 
−
** [http://www.uniprot.org/uniprot/O32038 O32038]
 
−
** [http://www.uniprot.org/uniprot/O67589 O67589]
 
−
** [http://www.uniprot.org/uniprot/P43817 P43817]
 
−
** [http://www.uniprot.org/uniprot/O51402 O51402]
 
−
** [http://www.uniprot.org/uniprot/Q9CE80 Q9CE80]
 
−
** [http://www.uniprot.org/uniprot/Q9ZE17 Q9ZE17]
 
−
** [http://www.uniprot.org/uniprot/Q9X1F4 Q9X1F4]
 
−
** [http://www.uniprot.org/uniprot/Q9JT23 Q9JT23]
 
−
** [http://www.uniprot.org/uniprot/O58776 O58776]
 
−
** [http://www.uniprot.org/uniprot/O84546 O84546]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7P2 Q9Z7P2]
 
−
** [http://www.uniprot.org/uniprot/Q9PHM7 Q9PHM7]
 
−
** [http://www.uniprot.org/uniprot/P47282 P47282]
 
−
** [http://www.uniprot.org/uniprot/Q51422 Q51422]
 
−
** [http://www.uniprot.org/uniprot/Q03577 Q03577]
 
−
** [http://www.uniprot.org/uniprot/P36429 P36429]
 
−
** [http://www.uniprot.org/uniprot/P75068 P75068]
 
−
** [http://www.uniprot.org/uniprot/P73851 P73851]
 
−
** [http://www.uniprot.org/uniprot/Q48979 Q48979]
 
−
** [http://www.uniprot.org/uniprot/Q49028 Q49028]
 
−
** [http://www.uniprot.org/uniprot/P04802 P04802]
 
−
** [http://www.uniprot.org/uniprot/P15179 P15179]
 
−
** [http://www.uniprot.org/uniprot/P21889 P21889]
 
−
** [http://www.uniprot.org/uniprot/P14868 P14868]
 
−
** [http://www.uniprot.org/uniprot/P15178 P15178]
 
−
** [http://www.uniprot.org/uniprot/O81892 O81892]
 
−
** [http://www.uniprot.org/uniprot/O74407 O74407]
 
−
** [http://www.uniprot.org/uniprot/O07683 O07683]
 
−
</div>
 
−
{{#set: ec-number=ec-6.1.1.12}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=aspartate--trna ligase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS01445

  • common-name:
    • hemc
  • transcription-direction:
    • negative
  • centisome-position:
    • 8.869832
  • left-end-position:
    • 340868
  • right-end-position:
    • 341923

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5189
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5188
    • 6 reactions found over 6 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS01445&oldid=94692"