Difference between revisions of "FISUC RS07440"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-9929 == * ec-number: ** [http://enzyme.expasy.org/EC/1.3.98.1 ec-1.3.98.1] * direction: ** left-to-right * common-name: ** dihydroorotate...")
(Created page with "Category:gene == Gene FISUC_RS07440 == * transcription-direction: ** positive * centisome-position: ** 47.17258 * left-end-position: ** 1812670 * right-end-position: *...")
 
(9 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction RXN-9929 ==
+
== Gene FISUC_RS07440 ==
−
* ec-number:
+
* transcription-direction:
−
** [http://enzyme.expasy.org/EC/1.3.98.1 ec-1.3.98.1]
+
** positive
−
* direction:
+
* centisome-position:
−
** left-to-right
+
** 47.17258   
−
* common-name:
+
* left-end-position:
−
** dihydroorotate oxidase
+
** 1812670
−
== Reaction formula ==
+
* right-end-position:
−
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[FUM]][c] '''=>''' 1 [[OROTATE]][c] '''+''' 1 [[SUC]][c]
+
** 1813227
−
== Gene(s) associated with this reaction  ==
+
== Organism(s) associated with this gene  ==
−
* Gene: [[FSU_RS02415]]
+
* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
* [[NADH-PEROXIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=positive}}
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
{{#set: centisome-position=47.17258    }}
−
* Gene: [[FISUC_RS00540]]
+
{{#set: left-end-position=1812670}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=1813227}}
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
{{#set: organism associated=fsucgem}}
−
== Pathway(s)  ==
+
{{#set: nb reaction associated=1}}
−
* [[PWY-7790]], UMP biosynthesis II:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
== Reconstruction information  ==
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== External links  ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30062 30062]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P74782 P74782]
 
−
** [http://www.uniprot.org/uniprot/Q63707 Q63707]
 
−
** [http://www.uniprot.org/uniprot/Q48240 Q48240]
 
−
** [http://www.uniprot.org/uniprot/P32746 P32746]
 
−
** [http://www.uniprot.org/uniprot/Q02127 Q02127]
 
−
** [http://www.uniprot.org/uniprot/P32748 P32748]
 
−
** [http://www.uniprot.org/uniprot/P28294 P28294]
 
−
** [http://www.uniprot.org/uniprot/P28272 P28272]
 
−
** [http://www.uniprot.org/uniprot/P46539 P46539]
 
−
** [http://www.uniprot.org/uniprot/Q9CFC9 Q9CFC9]
 
−
** [http://www.uniprot.org/uniprot/P25996 P25996]
 
−
** [http://www.uniprot.org/uniprot/Q58070 Q58070]
 
−
** [http://www.uniprot.org/uniprot/P0A7E1 P0A7E1]
 
−
** [http://www.uniprot.org/uniprot/Q9JX66 Q9JX66]
 
−
** [http://www.uniprot.org/uniprot/Q9PPB6 Q9PPB6]
 
−
** [http://www.uniprot.org/uniprot/Q9CFW8 Q9CFW8]
 
−
** [http://www.uniprot.org/uniprot/P45477 P45477]
 
−
** [http://www.uniprot.org/uniprot/P32747 P32747]
 
−
** [http://www.uniprot.org/uniprot/P07670 P07670]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01867 R01867]
 
−
</div>
 
−
{{#set: ec-number=ec-1.3.98.1}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=dihydroorotate oxidase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=genome|bthetaiotaomicron}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS07440

  • transcription-direction:
    • positive
  • centisome-position:
    • 47.17258
  • left-end-position:
    • 1812670
  • right-end-position:
    • 1813227

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS07440&oldid=94695"