Difference between revisions of "FSU RS04505"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-12093 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20] * direction: ** left-to-right * common-name: ** 7-cyano-7-dea...")
(Created page with "Category:gene == Gene FSU_RS04505 == * common-name: ** dnag * transcription-direction: ** positive * centisome-position: ** 27.461302 * left-end-position: ** 1055339 *...")
 
(12 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction RXN-12093 ==
+
== Gene FSU_RS04505 ==
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/6.3.4.20 ec-6.3.4.20]
 
−
* direction:
 
−
** left-to-right
 
 
* common-name:
 
* common-name:
−
** 7-cyano-7-deazaguanine synthase quec
+
** dnag
−
== Reaction formula ==
+
* transcription-direction:
−
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-13043]][c] '''=>''' 1 [[7-CYANO-7-DEAZAGUANINE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[WATER]][c]
+
** positive
−
== Gene(s) associated with this reaction  ==
+
* centisome-position:
−
* Gene: [[FISUC_RS14845]]
+
** 27.461302   
 +
* left-end-position:
 +
** 1055339
 +
* right-end-position:
 +
** 1057507
 +
== Organism(s) associated with this gene  ==
 +
* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
* [[RXN0-5021]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* Gene: [[FSU_RS01035]]
+
{{#set: common-name=dnag}}
−
** Category: [[annotation]]
+
{{#set: transcription-direction=positive}}
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
{{#set: centisome-position=27.461302    }}
−
** Category: [[orthology]]
+
{{#set: left-end-position=1055339}}
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
{{#set: right-end-position=1057507}}
−
== Pathway(s)  ==
+
{{#set: organism associated=fsucgem}}
−
* [[PWY-6703]], preQ0 biosynthesis:
+
{{#set: nb reaction associated=1}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
== Reconstruction information  ==
 
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== External links  ==
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27983 27983]
 
−
{{#set: ec-number=ec-6.3.4.20}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=7-cyano-7-deazaguanine synthase quec}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=ecoli|genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS04505

  • common-name:
    • dnag
  • transcription-direction:
    • positive
  • centisome-position:
    • 27.461302
  • left-end-position:
    • 1055339
  • right-end-position:
    • 1057507

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS04505&oldid=94696"