Difference between revisions of "FSU RS04505"

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(Created page with "Category:reaction == Reaction ARGSUCCINSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.5 ec-6.3.4.5] * direction: ** left-to-right * common-name: ** arginino...")
(Created page with "Category:gene == Gene FSU_RS04505 == * common-name: ** dnag * transcription-direction: ** positive * centisome-position: ** 27.461302 * left-end-position: ** 1055339 *...")
 
(3 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ARGSUCCINSYN-RXN ==
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== Gene FSU_RS04505 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/6.3.4.5 ec-6.3.4.5]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** argininosuccinate synthase
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** dnag
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== Reaction formula ==
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* transcription-direction:
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* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[L-CITRULLINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FSU_RS05065]]
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** 27.461302   
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* left-end-position:
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** 1055339
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* right-end-position:
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** 1057507
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[RXN0-5021]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS03175]]
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{{#set: common-name=dnag}}
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** Category: [[annotation]]
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{{#set: transcription-direction=positive}}
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: centisome-position=27.461302    }}
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== Pathway(s)  ==
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{{#set: left-end-position=1055339}}
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* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
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{{#set: right-end-position=1057507}}
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** '''2''' reactions found over '''3''' reactions in the full pathway
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{{#set: organism associated=fsucgem}}
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
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{{#set: nb reaction associated=1}}
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
 
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** '''5''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria):
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-4984]], urea cycle:
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P22768 P22768]
 
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** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4]
 
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** [http://www.uniprot.org/uniprot/P00966 P00966]
 
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** [http://www.uniprot.org/uniprot/P16460 P16460]
 
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** [http://www.uniprot.org/uniprot/P13256 P13256]
 
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** [http://www.uniprot.org/uniprot/P13257 P13257]
 
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** [http://www.uniprot.org/uniprot/P09034 P09034]
 
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** [http://www.uniprot.org/uniprot/P24532 P24532]
 
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** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7]
 
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** [http://www.uniprot.org/uniprot/P57799 P57799]
 
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** [http://www.uniprot.org/uniprot/Q60174 Q60174]
 
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** [http://www.uniprot.org/uniprot/P44315 P44315]
 
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** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1]
 
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** [http://www.uniprot.org/uniprot/P50986 P50986]
 
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** [http://www.uniprot.org/uniprot/Q06734 Q06734]
 
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** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1]
 
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** [http://www.uniprot.org/uniprot/Q59491 Q59491]
 
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</div>
 
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{{#set: ec-number=ec-6.3.4.5}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=argininosuccinate synthase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS04505

  • common-name:
    • dnag
  • transcription-direction:
    • positive
  • centisome-position:
    • 27.461302
  • left-end-position:
    • 1055339
  • right-end-position:
    • 1057507

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS04505&oldid=94696"