Difference between revisions of "FSU RS01295"

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(Created page with "Category:reaction == Reaction TRYPTOPHAN--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.2 ec-6.1.1.2] * direction: ** left-to-right * common-name:...")
(Created page with "Category:gene == Gene FSU_RS01295 == * transcription-direction: ** negative * centisome-position: ** 8.074179 * left-end-position: ** 310291 * right-end-position: ** 3...")
 
(11 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction TRYPTOPHAN--TRNA-LIGASE-RXN ==
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== Gene FSU_RS01295 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/6.1.1.2 ec-6.1.1.2]
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** negative
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* direction:
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* centisome-position:
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** left-to-right
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** 8.074179   
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* common-name:
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* left-end-position:
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** tryptophan--trna ligase
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** 310291
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== Reaction formula ==
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* right-end-position:
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* 1 [[ATP]][c] '''+''' 1 [[TRP]][c] '''+''' 1 [[TRP-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-TRP-tRNAs]][c] '''+''' 1 [[PPI]][c]
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** 311244
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FISUC_RS02435]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[MYRISTOYLACYLTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS04325]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[KDO-LIPASYN-PWY]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Pathway(s) ==
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* [[KDO-NAGLIPASYN-PWY]]
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* [[TRNA-CHARGING-PWY]], tRNA charging:
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** '''5''' reactions found over '''4''' reactions in the full pathway
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** '''20''' reactions found over '''21''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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== Reconstruction information  ==
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{{#set: centisome-position=8.074179    }}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: left-end-position=310291}}
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== External links  ==
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{{#set: right-end-position=311244}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: organism associated=fsucgem}}
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* RHEA:
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{{#set: nb reaction associated=1}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24081 24081]
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{{#set: nb pathway associated=2}}
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P23381 P23381]
 
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** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
 
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** [http://www.uniprot.org/uniprot/O84589 O84589]
 
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** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
 
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** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
 
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** [http://www.uniprot.org/uniprot/P43835 P43835]
 
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** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
 
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** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
 
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** [http://www.uniprot.org/uniprot/O26352 O26352]
 
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** [http://www.uniprot.org/uniprot/O51038 O51038]
 
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** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
 
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** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
 
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** [http://www.uniprot.org/uniprot/Q58810 Q58810]
 
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** [http://www.uniprot.org/uniprot/O83640 O83640]
 
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** [http://www.uniprot.org/uniprot/P67590 P67590]
 
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** [http://www.uniprot.org/uniprot/O67115 O67115]
 
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** [http://www.uniprot.org/uniprot/P47372 P47372]
 
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** [http://www.uniprot.org/uniprot/P32921 P32921]
 
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** [http://www.uniprot.org/uniprot/Q12109 Q12109]
 
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** [http://www.uniprot.org/uniprot/Q49901 Q49901]
 
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** [http://www.uniprot.org/uniprot/P75510 P75510]
 
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** [http://www.uniprot.org/uniprot/O42875 O42875]
 
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** [http://www.uniprot.org/uniprot/O96771 O96771]
 
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** [http://www.uniprot.org/uniprot/P17248 P17248]
 
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** [http://www.uniprot.org/uniprot/P21656 P21656]
 
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** [http://www.uniprot.org/uniprot/P04803 P04803]
 
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** [http://www.uniprot.org/uniprot/P00954 P00954]
 
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</div>
 
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{{#set: ec-number=ec-6.1.1.2}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=tryptophan--trna ligase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS01295

  • transcription-direction:
    • negative
  • centisome-position:
    • 8.074179
  • left-end-position:
    • 310291
  • right-end-position:
    • 311244

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS01295&oldid=94700"