Difference between revisions of "FISUC RS00100"

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(Created page with "Category:reaction == Reaction 2-DEHYDROPANTOATE-REDUCT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.169 ec-1.1.1.169] * direction: ** left-to-right * common-n...")
(Created page with "Category:gene == Gene FISUC_RS00100 == * transcription-direction: ** negative * centisome-position: ** 0.63607395 * left-end-position: ** 24442 * right-end-position: *...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction 2-DEHYDROPANTOATE-REDUCT-RXN ==
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== Gene FISUC_RS00100 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/1.1.1.169 ec-1.1.1.169]
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** negative
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* direction:
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* centisome-position:
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** left-to-right
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** 0.63607395   
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* common-name:
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* left-end-position:
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** 2-dehydropantoate 2-reductase
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** 24442
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== Reaction formula ==
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* right-end-position:
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* 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-PANTOATE]][c] '''+''' 1 [[NADP]][c]
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** 24933
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FSU_RS06490]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[DIHYDROFOLATEREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS04600]]
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* [[RXN-18357]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS03445]]
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* [[RXN-19329]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Pathway(s) associated ==
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== Pathway(s) ==
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* [[1CMET2-PWY]]
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* [[PWY-6654]], phosphopantothenate biosynthesis III (archaebacteria):
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** '''9''' reactions found over '''9''' reactions in the full pathway
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6614]]
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* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3841]]
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== Reconstruction information  ==
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: transcription-direction=negative}}
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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{{#set: centisome-position=0.63607395    }}
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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{{#set: left-end-position=24442}}
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== External links  ==
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{{#set: right-end-position=24933}}
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* RHEA:
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{{#set: organism associated=fsucgem}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16235 16235]
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{{#set: nb reaction associated=3}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02472 R02472]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9CFY8 Q9CFY8]
 
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** [http://www.uniprot.org/uniprot/Q9V0N0 Q9V0N0]
 
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{{#set: ec-number=ec-1.1.1.169}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=2-dehydropantoate 2-reductase}}
 
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{{#set: nb gene associated=3}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome|bthetaiotaomicron|ecoli}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS00100

  • transcription-direction:
    • negative
  • centisome-position:
    • 0.63607395
  • left-end-position:
    • 24442
  • right-end-position:
    • 24933

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • 1CMET2-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6614
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3841
    • 10 reactions found over 11 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS00100&oldid=94707"