Difference between revisions of "FSU RS01035"

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(Created page with "Category:reaction == Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.35 ec-4.1.1.35] * direction: ** left-to-right == Reac...")
(Created page with "Category:gene == Gene FSU_RS01035 == * common-name: ** quec * transcription-direction: ** negative * centisome-position: ** 6.479384 * left-end-position: ** 249003 * r...")
 
(10 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN ==
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== Gene FSU_RS01035 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/4.1.1.35 ec-4.1.1.35]
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** quec
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[PROTON]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[UDP-D-XYLOSE]][c]
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** 6.479384   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS13305]]
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** 249003
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* right-end-position:
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** 249656
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[RXN-12093]]
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** Category: [[annotation]]
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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== Pathway(s) ==
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== Pathway(s) associated ==
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* [[PWY-4821]], UDP-α-D-xylose biosynthesis:
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* [[PWY-6703]]
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** '''2''' reactions found over '''1''' reactions in the full pathway
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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{{#set: common-name=quec}}
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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{{#set: transcription-direction=negative}}
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== External links  ==
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{{#set: centisome-position=6.479384    }}
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* RHEA:
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{{#set: left-end-position=249003}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23917 23917]
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{{#set: right-end-position=249656}}
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* LIGAND-RXN:
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{{#set: organism associated=fsucgem}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01384 R01384]
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{{#set: nb reaction associated=1}}
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{{#set: ec-number=ec-4.1.1.35}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=bthetaiotaomicron}}
 

Latest revision as of 11:21, 17 October 2022

Gene FSU_RS01035

  • common-name:
    • quec
  • transcription-direction:
    • negative
  • centisome-position:
    • 6.479384
  • left-end-position:
    • 249003
  • right-end-position:
    • 249656

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6703
    • 4 reactions found over 4 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS01035&oldid=94708"