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| − | [[Category:reaction]] | + | [[Category:gene]] |
| − | == Reaction DIHYDROOROT-RXN == | + | == Gene FSU_RS11010 == |
| − | * ec-number:
| + | == Organism(s) associated with this gene == |
| − | ** [http://enzyme.expasy.org/EC/3.5.2.3 ec-3.5.2.3]
| + | * [[fsucgem]] |
| − | * direction:
| + | == Reaction(s) associated == |
| − | ** reversible
| + | * [[GLUTAMATESYN-RXN]] |
| − | * common-name:
| |
| − | ** dihydroorotase
| |
| − | == Reaction formula == | |
| − | * 1 [[DI-H-OROTATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] | |
| − | == Gene(s) associated with this reaction == | |
| − | * Gene: [[FSU_RS03160]] | |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
| |
| | ** Category: [[orthology]] | | ** Category: [[orthology]] |
| − | *** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | + | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a |
| − | *** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | + | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a |
| − | *** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | + | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a |
| − | * Gene: [[FISUC_RS05740]]
| + | == Pathway(s) associated == |
| − | ** Category: [[annotation]]
| + | * [[GLUTSYN-PWY]] |
| − | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | * Gene: [[FISUC_RS01280]]
| + | * [[GLUTAMINEFUM-PWY]] |
| − | ** Category: [[annotation]]
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
| + | {{#set: organism associated=fsucgem}} |
| − | * Gene: [[FSU_RS07640]]
| + | {{#set: nb reaction associated=1}} |
| − | ** Category: [[annotation]]
| + | {{#set: nb pathway associated=2}} |
| − | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | * [[PWY-7790]], UMP biosynthesis II: | |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway | |
| − | * [[PWY-7791]], UMP biosynthesis III: | |
| − | ** '''5''' reactions found over '''6''' reactions in the full pathway
| |
| − | * [[PWY-5686]], UMP biosynthesis I:
| |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway | |
| − | == Reconstruction information ==
| |
| − | * category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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| − | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
| |
| − | * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | == External links ==
| |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24299 24299]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01993 R01993]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P08955 P08955]
| |
| − | ** [http://www.uniprot.org/uniprot/P27708 P27708]
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| − | ** [http://www.uniprot.org/uniprot/Q91437 Q91437]
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| − | ** [http://www.uniprot.org/uniprot/Q58885 Q58885]
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| − | ** [http://www.uniprot.org/uniprot/Q9PIN6 Q9PIN6]
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| − | ** [http://www.uniprot.org/uniprot/P25995 P25995]
| |
| − | ** [http://www.uniprot.org/uniprot/P20051 P20051]
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| − | ** [http://www.uniprot.org/uniprot/P06204 P06204]
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| − | ** [http://www.uniprot.org/uniprot/P05020 P05020]
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| − | ** [http://www.uniprot.org/uniprot/P31301 P31301]
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| − | ** [http://www.uniprot.org/uniprot/Q9PNA0 Q9PNA0]
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| − | ** [http://www.uniprot.org/uniprot/Q9JVD6 Q9JVD6]
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| − | ** [http://www.uniprot.org/uniprot/P46538 P46538]
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| − | ** [http://www.uniprot.org/uniprot/P20054 P20054]
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| − | ** [http://www.uniprot.org/uniprot/P05990 P05990]
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| − | ** [http://www.uniprot.org/uniprot/Q06950 Q06950]
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| − | ** [http://www.uniprot.org/uniprot/P72934 P72934]
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| − | ** [http://www.uniprot.org/uniprot/P74438 P74438]
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| − | ** [http://www.uniprot.org/uniprot/O04904 O04904]
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| − | ** [http://www.uniprot.org/uniprot/P72170 P72170]
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| − | ** [http://www.uniprot.org/uniprot/O76138 O76138]
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| − | ** [http://www.uniprot.org/uniprot/O27199 O27199]
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| − | ** [http://www.uniprot.org/uniprot/P48795 P48795]
| |
| − | </div>
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| − | {{#set: ec-number=ec-3.5.2.3}} | |
| − | {{#set: direction=reversible}}
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| − | {{#set: common-name=dihydroorotase}}
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| − | {{#set: nb gene associated=4}} | |
| − | {{#set: nb pathway associated=3}} | |
| − | {{#set: reconstruction category=annotation|orthology}}
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| − | {{#set: reconstruction tool=pathwaytools|orthofinder}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=bifidobacterium|genome|plantarum|faecalibacterium|ecoli}}
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