Difference between revisions of "FISUC RS06860"

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(Created page with "Category:reaction == Reaction ASPARTATEKIN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4] * direction: ** left-to-right * common-name: ** aspartat...")
(Created page with "Category:gene == Gene FISUC_RS06860 == * transcription-direction: ** negative * centisome-position: ** 44.283573 * left-end-position: ** 1701656 * right-end-position:...")
 
(9 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ASPARTATEKIN-RXN ==
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== Gene FISUC_RS06860 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4]
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** negative
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* direction:
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* centisome-position:
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** left-to-right
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** 44.283573   
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* common-name:
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* left-end-position:
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** aspartate kinase
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** 1701656
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== Reaction formula ==
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* right-end-position:
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* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-BETA-ASPARTYL-P]][c]
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** 1703164
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FISUC_RS06845]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[PHOSMANMUT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS08755]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[PWY-7586]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** Category: [[orthology]]
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* [[PWY-5659]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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== Pathway(s) ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[PWY-2941]], L-lysine biosynthesis II:
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6559]], spermidine biosynthesis II:
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-5097]], L-lysine biosynthesis VI:
 
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** '''7''' reactions found over '''7''' reactions in the full pathway
 
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-2942]], L-lysine biosynthesis III:
 
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** '''7''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7153]], grixazone biosynthesis:
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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* [[P101-PWY]], ectoine biosynthesis:
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-6562]], norspermidine biosynthesis:
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7977]], L-methionine biosynthesis IV (archaea):
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6160]], 3-dehydroquinate biosynthesis II (archaea):
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* [[PWY-7456]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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** '''3''' reactions found over '''7''' reactions in the full pathway
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</div>
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* [[PWY-882]]
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== Reconstruction information  ==
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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{{#set: transcription-direction=negative}}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: centisome-position=44.283573    }}
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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{{#set: left-end-position=1701656}}
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* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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{{#set: right-end-position=1703164}}
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== External links  ==
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{{#set: organism associated=fsucgem}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: nb reaction associated=1}}
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* RHEA:
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{{#set: nb pathway associated=4}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23779 23779]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00480 R00480]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P08495 P08495]
 
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** [http://www.uniprot.org/uniprot/P44505 P44505]
 
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** [http://www.uniprot.org/uniprot/P27725 P27725]
 
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** [http://www.uniprot.org/uniprot/Q04795 Q04795]
 
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** [http://www.uniprot.org/uniprot/Q57991 Q57991]
 
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** [http://www.uniprot.org/uniprot/P00561 P00561]
 
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** [http://www.uniprot.org/uniprot/P00562 P00562]
 
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** [http://www.uniprot.org/uniprot/Q9PHT4 Q9PHT4]
 
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** [http://www.uniprot.org/uniprot/Q9JTN3 Q9JTN3]
 
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** [http://www.uniprot.org/uniprot/P53553 P53553]
 
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** [http://www.uniprot.org/uniprot/P10869 P10869]
 
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** [http://www.uniprot.org/uniprot/P08660 P08660]
 
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** [http://www.uniprot.org/uniprot/P26512 P26512]
 
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** [http://www.uniprot.org/uniprot/P37142 P37142]
 
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** [http://www.uniprot.org/uniprot/P41403 P41403]
 
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** [http://www.uniprot.org/uniprot/P0A4Z9 P0A4Z9]
 
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** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 
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** [http://www.uniprot.org/uniprot/P49079 P49079]
 
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** [http://www.uniprot.org/uniprot/P49080 P49080]
 
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** [http://www.uniprot.org/uniprot/P93402 P93402]
 
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** [http://www.uniprot.org/uniprot/O81852 O81852]
 
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** [http://www.uniprot.org/uniprot/O63067 O63067]
 
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** [http://www.uniprot.org/uniprot/O65027 O65027]
 
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</div>
 
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{{#set: ec-number=ec-2.7.2.4}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=aspartate kinase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=11}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=plantarum|genome|bthetaiotaomicron|ecoli}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS06860

  • transcription-direction:
    • negative
  • centisome-position:
    • 44.283573
  • left-end-position:
    • 1701656
  • right-end-position:
    • 1703164

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7586
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5659
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7456
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-882
    • 3 reactions found over 8 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS06860&oldid=94715"