Difference between revisions of "FSU RS06080"
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(Created page with "Category:reaction == Reaction 3.4.13.22-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.13.22 ec-3.4.13.22] * direction: ** left-to-right == Reaction formula == *...") |
(Created page with "Category:gene == Gene FSU_RS06080 == * common-name: ** carb * transcription-direction: ** negative * centisome-position: ** 38.537354 * left-end-position: ** 1480992 *...") |
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− | [[Category: | + | [[Category:gene]] |
− | == | + | == Gene FSU_RS06080 == |
− | * | + | * common-name: |
− | ** | + | ** carb |
− | * | + | * transcription-direction: |
− | ** | + | ** negative |
− | == | + | * centisome-position: |
− | * | + | ** 38.537354 |
− | + | * left-end-position: | |
− | + | ** 1480992 | |
+ | * right-end-position: | ||
+ | ** 1484210 | ||
+ | == Organism(s) associated with this gene == | ||
+ | * [[fsucgem]] | ||
+ | == Reaction(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[CARBPSYN-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** | + | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a |
− | == Pathway(s) | + | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a |
− | * [[PWY- | + | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a |
− | ** ''' | + | *** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a |
− | * [[PWY- | + | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a |
− | ** ''' | + | * [[GLUTAMIN-RXN]] |
− | + | ** Category: [[annotation]] | |
− | * | + | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a |
− | + | * [[RXN-13202]] | |
− | * | + | ** Category: [[annotation]] |
− | ** [ | + | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a |
− | * | + | * [[RXN-14196]] |
− | ** [ | + | ** Category: [[annotation]] |
− | {{#set: | + | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: direction= | + | * [[RXN-16909]] |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: | + | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: | + | * [[RXN-16910]] |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: | + | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a |
− | {{#set: | + | </div> |
+ | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[PWY-5686]] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7790]] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5154]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[ARGSYN-PWY]] | ||
+ | ** '''5''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7400]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7791]] | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[ARGSYNBSUB-PWY]] | ||
+ | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY490-4]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5921]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[CITRULBIO-PWY]] | ||
+ | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[GLUTAMINDEG-PWY]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-4984]] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7693]] | ||
+ | ** '''3''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY0-41]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[CITRULLINE-DEG-PWY]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: common-name=carb}} | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: centisome-position=38.537354 }} | ||
+ | {{#set: left-end-position=1480992}} | ||
+ | {{#set: right-end-position=1484210}} | ||
+ | {{#set: organism associated=fsucgem}} | ||
+ | {{#set: nb reaction associated=6}} | ||
+ | {{#set: nb pathway associated=15}} |
Latest revision as of 11:21, 17 October 2022
Contents
Gene FSU_RS06080
- common-name:
- carb
- transcription-direction:
- negative
- centisome-position:
- 38.537354
- left-end-position:
- 1480992
- right-end-position:
- 1484210
Organism(s) associated with this gene
Reaction(s) associated
- CARBPSYN-RXN
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: orthology
- source: ecoli; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: plantarum; tool: orthofinder; comment: n.a
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- Category: annotation
- GLUTAMIN-RXN
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13202
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14196
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16909
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16910
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5686
- 6 reactions found over 6 reactions in the full pathway
- PWY-7790
- 6 reactions found over 6 reactions in the full pathway
- PWY-5154
- 7 reactions found over 9 reactions in the full pathway
- ARGSYN-PWY
- 5 reactions found over 4 reactions in the full pathway
- PWY-7400
- 7 reactions found over 9 reactions in the full pathway
- PWY-7791
- 5 reactions found over 6 reactions in the full pathway
- ARGSYNBSUB-PWY
- 9 reactions found over 9 reactions in the full pathway
- PWY490-4
- 3 reactions found over 4 reactions in the full pathway
- PWY-5921
- 4 reactions found over 4 reactions in the full pathway
- CITRULBIO-PWY
- 8 reactions found over 8 reactions in the full pathway
- GLUTAMINDEG-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-4984
- 5 reactions found over 5 reactions in the full pathway
- PWY-7693
- 3 reactions found over 13 reactions in the full pathway
- PWY0-41
- 2 reactions found over 5 reactions in the full pathway
- CITRULLINE-DEG-PWY
- 3 reactions found over 3 reactions in the full pathway