Difference between revisions of "FISUC RS00790"

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(Created page with "Category:reaction == Reaction SULFATE-ADENYLYLTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4] * direction: ** reversible * common-name: ** su...")
(Created page with "Category:gene == Gene FISUC_RS00790 == * transcription-direction: ** positive * centisome-position: ** 4.7005243 * left-end-position: ** 180624 * right-end-position: *...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction SULFATE-ADENYLYLTRANS-RXN ==
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== Gene FISUC_RS00790 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4]
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** positive
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* direction:
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* centisome-position:
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** reversible
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** 4.7005243   
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* common-name:
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* left-end-position:
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** sulfate adenylyltransferase subunit cysd
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** 180624
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** sulfate adenylyltransferase
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* right-end-position:
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== Reaction formula ==
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** 181979
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* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[fsucgem]]
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* Gene: [[FSU_RS02630]]
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== Reaction(s) associated ==
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* [[ACETYLHOMOSER-CYS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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* [[ACSERLY-RXN]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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* Gene: [[FSU_RS02625]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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* [[O-ACETYLHOMOSERINE-THIOL-LYASE-RXN]]
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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* Gene: [[FISUC_RS00750]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS00745]]
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* [[RXN-12726]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) ==
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== Pathway(s) associated ==
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* [[PWY-5340]], sulfate activation for sulfonation:
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* [[PWY-5344]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[P224-PWY]], dissimilatory sulfate reduction II (to thiosulfate):
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6683]], assimilatory sulfate reduction III:
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)):
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[SULFMETII-PWY]], assimilatory sulfate reduction II:
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-5278]], sulfite oxidation III:
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[CYSTSYN-PWY]]
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-7174]]
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== External links  ==
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** '''1''' reactions found over '''4''' reactions in the full pathway
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6936]]
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* RHEA:
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** '''3''' reactions found over '''5''' reactions in the full pathway
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136]
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{{#set: transcription-direction=positive}}
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* LIGAND-RXN:
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{{#set: centisome-position=4.7005243    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
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{{#set: left-end-position=180624}}
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* UNIPROT:
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{{#set: right-end-position=181979}}
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** [http://www.uniprot.org/uniprot/Q12650 Q12650]
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{{#set: organism associated=fsucgem}}
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** [http://www.uniprot.org/uniprot/O33581 O33581]
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{{#set: nb reaction associated=4}}
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** [http://www.uniprot.org/uniprot/O34764 O34764]
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{{#set: nb pathway associated=4}}
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** [http://www.uniprot.org/uniprot/Q10600 Q10600]
 
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** [http://www.uniprot.org/uniprot/O67174 O67174]
 
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** [http://www.uniprot.org/uniprot/P21156 P21156]
 
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** [http://www.uniprot.org/uniprot/O23324 O23324]
 
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** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
 
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** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
 
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** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
 
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** [http://www.uniprot.org/uniprot/P28604 P28604]
 
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** [http://www.uniprot.org/uniprot/Q27128 Q27128]
 
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** [http://www.uniprot.org/uniprot/P23845 P23845]
 
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** [http://www.uniprot.org/uniprot/O43252 O43252]
 
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** [http://www.uniprot.org/uniprot/Q43170 Q43170]
 
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** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 
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** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 
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** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 
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** [http://www.uniprot.org/uniprot/P08536 P08536]
 
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** [http://www.uniprot.org/uniprot/P74241 P74241]
 
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** [http://www.uniprot.org/uniprot/O48888 O48888]
 
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** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 
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** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 
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** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 
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** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 
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** [http://www.uniprot.org/uniprot/P13441 P13441]
 
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** [http://www.uniprot.org/uniprot/P13442 P13442]
 
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</div>
 
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{{#set: ec-number=ec-2.7.7.4}}
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=sulfate adenylyltransferase subunit cysd|sulfate adenylyltransferase}}
 
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{{#set: nb gene associated=4}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome|bthetaiotaomicron}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS00790

  • transcription-direction:
    • positive
  • centisome-position:
    • 4.7005243
  • left-end-position:
    • 180624
  • right-end-position:
    • 181979

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5344
    • 2 reactions found over 2 reactions in the full pathway
  • CYSTSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7174
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6936
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS00790&oldid=94733"