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| − | [[Category:reaction]] | + | [[Category:gene]] |
| − | == Reaction THIOREDOXIN-REDUCT-NADPH-RXN == | + | == Gene FISUC_RS08330 == |
| − | * ec-number: | + | * transcription-direction: |
| − | ** [http://enzyme.expasy.org/EC/1.8.1.9 ec-1.8.1.9] | + | ** positive |
| − | * direction: | + | * centisome-position: |
| − | ** left-to-right | + | ** 53.17044 |
| − | == Reaction formula ==
| + | * left-end-position: |
| − | * 1 [[NADPH]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Red-Thioredoxin]][c] | + | ** 2043146 |
| − | == Gene(s) associated with this reaction == | + | * right-end-position: |
| − | * Gene: [[FSU_RS05690]] | + | ** 2044072 |
| − | ** Category: [[orthology]]
| + | == Organism(s) associated with this gene == |
| − | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| + | * [[fsucgem]] |
| − | * Gene: [[FSU_RS03090]]
| + | == Reaction(s) associated == |
| − | ** Category: [[orthology]]
| + | * [[RXN0-5131]] |
| − | *** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| + | ** Category: [[annotation]] |
| − | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| + | *** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a |
| − | *** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| + | {{#set: transcription-direction=positive}} |
| − | * Gene: [[FSU_RS13400]]
| + | {{#set: centisome-position=53.17044 }} |
| − | ** Category: [[orthology]]
| + | {{#set: left-end-position=2043146}} |
| − | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| + | {{#set: right-end-position=2044072}} |
| − | * Gene: [[FSU_RS02405]]
| + | {{#set: organism associated=fsucgem}} |
| − | ** Category: [[orthology]]
| + | {{#set: nb reaction associated=1}} |
| − | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | * [[THIOREDOX-PWY]], thioredoxin pathway: | |
| − | ** '''1''' reactions found over '''2''' reactions in the full pathway | |
| − | == Reconstruction information ==
| |
| − | * category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | |
| − | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | |
| − | == External links ==
| |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
| |
| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/Q05741 Q05741]
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| − | ** [http://www.uniprot.org/uniprot/P56431 P56431]
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| − | ** [http://www.uniprot.org/uniprot/O28718 O28718]
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| − | ** [http://www.uniprot.org/uniprot/P80880 P80880]
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| − | ** [http://www.uniprot.org/uniprot/P43496 P43496]
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| − | ** [http://www.uniprot.org/uniprot/P94284 P94284]
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| − | ** [http://www.uniprot.org/uniprot/O66790 O66790]
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| − | ** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
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| − | ** [http://www.uniprot.org/uniprot/P47348 P47348]
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| − | ** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
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| − | ** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
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| − | ** [http://www.uniprot.org/uniprot/O26804 O26804]
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| − | ** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
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| − | ** [http://www.uniprot.org/uniprot/P43788 P43788]
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| − | ** [http://www.uniprot.org/uniprot/Q58931 Q58931]
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| − | ** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
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| − | ** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
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| − | ** [http://www.uniprot.org/uniprot/P23160 P23160]
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| − | ** [http://www.uniprot.org/uniprot/P39916 P39916]
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| − | ** [http://www.uniprot.org/uniprot/Q39242 Q39242]
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| − | ** [http://www.uniprot.org/uniprot/Q39243 Q39243]
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| − | ** [http://www.uniprot.org/uniprot/P38816 P38816]
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| − | ** [http://www.uniprot.org/uniprot/Q25861 Q25861]
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| − | ** [http://www.uniprot.org/uniprot/P29509 P29509]
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| − | ** [http://www.uniprot.org/uniprot/P52213 P52213]
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| − | ** [http://www.uniprot.org/uniprot/Q16881 Q16881]
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| − | ** [http://www.uniprot.org/uniprot/P75531 P75531]
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| − | ** [http://www.uniprot.org/uniprot/P74746 P74746]
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| − | ** [http://www.uniprot.org/uniprot/P46843 P46843]
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| − | ** [http://www.uniprot.org/uniprot/O54535 O54535]
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| − | ** [http://www.uniprot.org/uniprot/Q39951 Q39951]
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| − | ** [http://www.uniprot.org/uniprot/Q92375 Q92375]
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| − | ** [http://www.uniprot.org/uniprot/P52215 P52215]
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| − | ** [http://www.uniprot.org/uniprot/P51978 P51978]
| |
| − | </div>
| |
| − | {{#set: ec-number=ec-1.8.1.9}} | |
| − | {{#set: direction=left-to-right}} | |
| − | {{#set: nb gene associated=4}}
| |
| − | {{#set: nb pathway associated=1}} | |
| − | {{#set: reconstruction category=orthology}} | |
| − | {{#set: reconstruction tool=orthofinder}} | |
| − | {{#set: reconstruction comment=n.a}} | |
| − | {{#set: reconstruction source=bifidobacterium|ecoli|plantarum}}
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