Difference between revisions of "FSU RS03265"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 2OXOGLUTARATEDEH-RXN == * common-name: ** 2-oxoglutarate dehydrogenase complex * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.m9 ec-1.2.1...")
(Created page with "Category:gene == Gene FSU_RS03265 == * transcription-direction: ** negative * centisome-position: ** 19.808983 * left-end-position: ** 761260 * right-end-position: **...")
 
(4 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction 2OXOGLUTARATEDEH-RXN ==
+
== Gene FSU_RS03265 ==
−
* common-name:
+
* transcription-direction:
−
** 2-oxoglutarate dehydrogenase complex
+
** negative
−
* ec-number:
+
* centisome-position:
−
** [http://enzyme.expasy.org/EC/1.2.1.m9 ec-1.2.1.m9]
+
** 19.808983   
−
* direction:
+
* left-end-position:
−
** left-to-right
+
** 761260
−
* synonymous:
+
* right-end-position:
−
** 2-oxoglutarate dehydrogenation
+
** 763671
−
** α-ketoglutarate oxidative decarboxylation
+
== Organism(s) associated with this gene ==
−
== Reaction formula ==
+
* [[fsucgem]]
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUC-COA]][c]
+
== Reaction(s) associated ==
−
== Gene(s) associated with this reaction ==
+
* [[RXN-11135]]
−
== Pathway(s) ==
+
** Category: [[manual]]
−
* [[TCA]], TCA cycle I (prokaryotic):
+
*** source: [[add_expert_reactions]]; tool: [[unknown-tool]]; comment: added to improve flux in sugars
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
* [[RXN0-4261]]
−
* [[PWY-7254]], TCA cycle VII (acetate-producers):
+
** Category: [[annotation]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-5690]], TCA cycle II (plants and fungi):
+
{{#set: transcription-direction=negative}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=19.808983    }}
−
== Reconstruction information  ==
+
{{#set: left-end-position=761260}}
−
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
+
{{#set: right-end-position=763671}}
−
== External links  ==
+
{{#set: organism associated=fsucgem}}
−
* RHEA:
+
{{#set: nb reaction associated=2}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27787 27787]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
 
−
{{#set: common-name=2-oxoglutarate dehydrogenase complex}}
 
−
{{#set: ec-number=ec-1.2.1.m9}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: synonymous=2-oxoglutarate dehydrogenation|α-ketoglutarate oxidative decarboxylation}}
 
−
{{#set: nb gene associated=0}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction tool=curation}}
 
−
{{#set: reconstruction comment=added for gap-filling}}
 
−
{{#set: reconstruction source=reactions_add_gp}}
 

Latest revision as of 11:22, 17 October 2022

Gene FSU_RS03265

  • transcription-direction:
    • negative
  • centisome-position:
    • 19.808983
  • left-end-position:
    • 761260
  • right-end-position:
    • 763671

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS03265&oldid=94761"