Difference between revisions of "3.2.1.91-RXN"

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(Created page with "Category:reaction == Reaction RXN-14074 == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.4 ec-2.7.4.4] * direction: ** left-to-right == Reaction formula == * 1 [[AMP]...")
(Created page with "Category:reaction == Reaction 3.2.1.91-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.91 ec-3.2.1.91] * direction: ** left-to-right == Reaction formula == * 1 [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14074 ==
+
== Reaction 3.2.1.91-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.4.4 ec-2.7.4.4]
+
** [http://enzyme.expasy.org/EC/3.2.1.91 ec-3.2.1.91]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMP]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GDP]][c]
+
* 1 [[Cellodextrins]][c] '''+''' n [[WATER]][c] '''=>''' n+1 [[CELLOBIOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS15240]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6788]], cellulose degradation II (fungi):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: added in the first version of the fibrobacter gem manually
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29864 29864]
+
* UNIPROT:
−
{{#set: ec-number=ec-2.7.4.4}}
+
** [http://www.uniprot.org/uniprot/P07986 P07986]
 +
** [http://www.uniprot.org/uniprot/P07987 P07987]
 +
** [http://www.uniprot.org/uniprot/Q6UJX9 Q6UJX9]
 +
** [http://www.uniprot.org/uniprot/Q60029 Q60029]
 +
** [http://www.uniprot.org/uniprot/Q01763 Q01763]
 +
** [http://www.uniprot.org/uniprot/P62694 P62694]
 +
** [http://www.uniprot.org/uniprot/P13860 P13860]
 +
** [http://www.uniprot.org/uniprot/Q06886 Q06886]
 +
** [http://www.uniprot.org/uniprot/P10474 P10474]
 +
** [http://www.uniprot.org/uniprot/P19355 P19355]
 +
** [http://www.uniprot.org/uniprot/Q01599 Q01599]
 +
** [http://www.uniprot.org/uniprot/Q01600 Q01600]
 +
** [http://www.uniprot.org/uniprot/P15828 P15828]
 +
** [http://www.uniprot.org/uniprot/P38535 P38535]
 +
** [http://www.uniprot.org/uniprot/Q09431 Q09431]
 +
** [http://www.uniprot.org/uniprot/P38676 P38676]
 +
** [http://www.uniprot.org/uniprot/Q59325 Q59325]
 +
** [http://www.uniprot.org/uniprot/P50899 P50899]
 +
** [http://www.uniprot.org/uniprot/P49075 P49075]
 +
** [http://www.uniprot.org/uniprot/Q9XCD4 Q9XCD4]
 +
</div>
 +
{{#set: ec-number=ec-3.2.1.91}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added in the first version of the fibrobacter gem manually}}
−
{{#set: reconstruction source=bifidobacterium|ecoli|faecalibacterium}}
+
{{#set: reconstruction source=add_expert_reactions}}

Latest revision as of 11:15, 17 October 2022

Reaction 3.2.1.91-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6788, cellulose degradation II (fungi):
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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