Difference between revisions of "RXN66-477"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 6PGLUCONDEHYDROG-RXN == * common-name: ** phosphogluconate dehydrogenase [nad(p)+-dependent, decarboxylating] * ec-number: ** [http://enzyme....")
(Created page with "Category:reaction == Reaction RXN66-477 == * common-name: ** straight chain fatty acyl-coa ligase ** long-chain fatty acid--coa ligase * ec-number: ** [http://enzyme.expas...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 6PGLUCONDEHYDROG-RXN ==
+
== Reaction RXN66-477 ==
 
* common-name:
 
* common-name:
−
** phosphogluconate dehydrogenase [nad(p)+-dependent, decarboxylating]
+
** straight chain fatty acyl-coa ligase
 +
** long-chain fatty acid--coa ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.351 ec-1.1.1.351]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* synonymous:
 
−
** 6pgd
 
−
** phosphogluconic acid dehydrogenase
 
−
** 6-phosphogluconic carboxylase
 
−
** 6-phosphogluconic dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-2961]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[RIBULOSE-5P]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[Odd-Straight-Chain-234-Sat-FA]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Odd-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS14015]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS12045]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P122-PWY]], heterolactic fermentation:
+
* [[PWY66-388]], fatty acid α-oxidation III:
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: added to improve flux in sugars
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: common-name=straight chain fatty acyl-coa ligase|long-chain fatty acid--coa ligase}}
−
* RHEA:
+
{{#set: ec-number=ec-6.2.1.3}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10117 10117]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P14332 P14332]
 
−
** [http://www.uniprot.org/uniprot/P31072 P31072]
 
−
** [http://www.uniprot.org/uniprot/Q9CDN4 Q9CDN4]
 
−
** [http://www.uniprot.org/uniprot/P47506 P47506]
 
−
** [http://www.uniprot.org/uniprot/Q9JWS3 Q9JWS3]
 
−
** [http://www.uniprot.org/uniprot/P43774 P43774]
 
−
** [http://www.uniprot.org/uniprot/P12013 P12013]
 
−
** [http://www.uniprot.org/uniprot/P41576 P41576]
 
−
** [http://www.uniprot.org/uniprot/P00350 P00350]
 
−
** [http://www.uniprot.org/uniprot/P00349 P00349]
 
−
** [http://www.uniprot.org/uniprot/P52209 P52209]
 
−
** [http://www.uniprot.org/uniprot/P41581 P41581]
 
−
** [http://www.uniprot.org/uniprot/P41582 P41582]
 
−
** [http://www.uniprot.org/uniprot/Q59275 Q59275]
 
−
** [http://www.uniprot.org/uniprot/P41583 P41583]
 
−
** [http://www.uniprot.org/uniprot/Q60254 Q60254]
 
−
** [http://www.uniprot.org/uniprot/P37754 P37754]
 
−
** [http://www.uniprot.org/uniprot/Q59410 Q59410]
 
−
** [http://www.uniprot.org/uniprot/P52207 P52207]
 
−
** [http://www.uniprot.org/uniprot/P70718 P70718]
 
−
** [http://www.uniprot.org/uniprot/Q7M451 Q7M451]
 
−
** [http://www.uniprot.org/uniprot/P41572 P41572]
 
−
** [http://www.uniprot.org/uniprot/P14062 P14062]
 
−
** [http://www.uniprot.org/uniprot/P21577 P21577]
 
−
** [http://www.uniprot.org/uniprot/P38720 P38720]
 
−
** [http://www.uniprot.org/uniprot/Q40311 Q40311]
 
−
** [http://www.uniprot.org/uniprot/P53319 P53319]
 
−
** [http://www.uniprot.org/uniprot/O81237 O81237]
 
−
** [http://www.uniprot.org/uniprot/O81238 O81238]
 
−
** [http://www.uniprot.org/uniprot/O81239 O81239]
 
−
** [http://www.uniprot.org/uniprot/O22111 O22111]
 
−
** [http://www.uniprot.org/uniprot/Q17761 Q17761]
 
−
** [http://www.uniprot.org/uniprot/O32911 O32911]
 
−
</div>
 
−
{{#set: common-name=phosphogluconate dehydrogenase [nad(p)+-dependent, decarboxylating]}}
 
−
{{#set: ec-number=ec-1.1.1.351}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: synonymous=6pgd|6-phosphogluconic carboxylase|phosphogluconic acid dehydrogenase|6-phosphogluconic dehydrogenase}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=0}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added to improve flux in sugars}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=add_expert_reactions}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:15, 17 October 2022

Reaction RXN66-477

  • common-name:
    • straight chain fatty acyl-coa ligase
    • long-chain fatty acid--coa ligase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-388, fatty acid α-oxidation III:
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN66-477&oldid=92204"