Difference between revisions of "NADH-DEHYDROGENASE-QUINONE-RXN"

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(Created page with "Category:reaction == Reaction 3.5.5.1-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] * direction: ** left-to-right * common-name: ** nitrilase ==...")
(Created page with "Category:reaction == Reaction NADH-DEHYDROGENASE-QUINONE-RXN == * common-name: ** nadh dehydrogenase (quinone) ** nadh-quinone oxidoreductase subunit d ** nadh-quinone oxi...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.5.5.1-RXN ==
+
== Reaction NADH-DEHYDROGENASE-QUINONE-RXN ==
 +
* common-name:
 +
** nadh dehydrogenase (quinone)
 +
** nadh-quinone oxidoreductase subunit d
 +
** nadh-quinone oxidoreductase subunit nuok
 +
** hypothetical protein
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1]
+
** [http://enzyme.expasy.org/EC/1.6.5.11 ec-1.6.5.11]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** nitrilase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Nitriles]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[Carboxylates]][c]
+
* 1 [[CPD-3766]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MENADIOL]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS03965]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[FSU_RS12650]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS12685]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS11785]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS11765]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS10725]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS10720]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS10690]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS12680]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS13735]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS02085]]
+
* Gene: [[FSU_RS13755]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7998]], menaquinol-4 biosynthesis II:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21724 21724]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00540 R00540]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02964 R02964]
−
* UNIPROT:
+
{{#set: common-name=hypothetical protein|nadh dehydrogenase (quinone)|nadh-quinone oxidoreductase subunit nuok|nadh-quinone oxidoreductase subunit d}}
−
** [http://www.uniprot.org/uniprot/P10045 P10045]
+
{{#set: ec-number=ec-1.6.5.11}}
−
** [http://www.uniprot.org/uniprot/P20960 P20960]
 
−
** [http://www.uniprot.org/uniprot/Q59329 Q59329]
 
−
** [http://www.uniprot.org/uniprot/P32961 P32961]
 
−
** [http://www.uniprot.org/uniprot/P32962 P32962]
 
−
** [http://www.uniprot.org/uniprot/Q55949 Q55949]
 
−
** [http://www.uniprot.org/uniprot/Q42965 Q42965]
 
−
** [http://www.uniprot.org/uniprot/Q42966 Q42966]
 
−
** [http://www.uniprot.org/uniprot/Q23384 Q23384]
 
−
** [http://www.uniprot.org/uniprot/P46010 P46010]
 
−
** [http://www.uniprot.org/uniprot/O04907 O04907]
 
−
** [http://www.uniprot.org/uniprot/P46011 P46011]
 
−
{{#set: ec-number=ec-3.5.5.1}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitrilase}}
+
{{#set: nb gene associated=10}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=0}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
 
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:15, 17 October 2022

Reaction NADH-DEHYDROGENASE-QUINONE-RXN

  • common-name:
    • nadh dehydrogenase (quinone)
    • nadh-quinone oxidoreductase subunit d
    • nadh-quinone oxidoreductase subunit nuok
    • hypothetical protein
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7998, menaquinol-4 biosynthesis II:
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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