Difference between revisions of "O-SUCCINYLBENZOATE-COA-SYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-17874 == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18] * direction: ** left-to-right * common-name: ** type i meth...")
(Created page with "Category:reaction == Reaction O-SUCCINYLBENZOATE-COA-SYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.113 ec-4.2.1.113] * direction: ** left-to-right == React...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-17874 ==
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== Reaction O-SUCCINYLBENZOATE-COA-SYN-RXN ==
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
+
** [http://enzyme.expasy.org/EC/4.2.1.113 ec-4.2.1.113]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
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* common-name:
 
−
** type i methionyl aminopeptidase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[L-methionyl-L-cysteinyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-L-cysteine]][c]
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* 1 [[CPD-9923]][c] '''=>''' 1 [[O-SUCCINYLBENZOATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS04230]]
 
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** Category: [[annotation]]
 
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*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FISUC_RS02340]]
 
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** Category: [[annotation]]
 
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*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-7799]], Arg/N-end rule pathway (eukaryotic):
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* [[PWY-5837]], 2-carboxy-1,4-naphthoquinol biosynthesis:
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** '''4''' reactions found over '''14''' reactions in the full pathway
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7800]], Ac/N-end rule pathway:
 
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** '''6''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_spontaneous]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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{{#set: ec-number=ec-3.4.11.18}}
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* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10197 10197]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04031 R04031]
 +
{{#set: ec-number=ec-4.2.1.113}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=type i methionyl aminopeptidase}}
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{{#set: nb gene associated=0}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_spontaneous}}
−
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
 

Latest revision as of 11:16, 17 October 2022

Reaction O-SUCCINYLBENZOATE-COA-SYN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5837, 2-carboxy-1,4-naphthoquinol biosynthesis:
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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