Difference between revisions of "TRANSALDOL-RXN"

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(Created page with "Category:reaction == Reaction RXN-20524 == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.41 ec-2.7.7.41] * direction: ** left-to-right * common-name: ** hypothetical...")
(Created page with "Category:reaction == Reaction TRANSALDOL-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.2 ec-2.2.1.2] * direction: ** reversible == Reaction formula == * 1 D-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-20524 ==
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== Reaction TRANSALDOL-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.41 ec-2.7.7.41]
+
** [http://enzyme.expasy.org/EC/2.2.1.2 ec-2.2.1.2]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** hypothetical protein
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-Acyl-2-Arachidonoyl-Glycerol-P]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CDP-1-Acyl-2-Arachidonoyl-Glycerols]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[GAP]][c] '''<=>''' 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS09230]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FSU_RS11170]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[P124-PWY]], Bifidobacterium shunt:
 +
** '''13''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5723]], Rubisco shunt:
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle):
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: added to improve flux in sugars
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.7.7.41}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: direction=left-to-right}}
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* RHEA:
−
{{#set: common-name=hypothetical protein}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17056 17056]
−
{{#set: nb gene associated=2}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01827 R01827]
−
{{#set: reconstruction category=annotation}}
+
* UNIPROT:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P17441 P17441]
−
{{#set: reconstruction comment=n.a}}
+
** [http://www.uniprot.org/uniprot/P17440 P17440]
−
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
+
** [http://www.uniprot.org/uniprot/P37837 P37837]
 +
** [http://www.uniprot.org/uniprot/P45055 P45055]
 +
** [http://www.uniprot.org/uniprot/Q9JSU1 Q9JSU1]
 +
** [http://www.uniprot.org/uniprot/P0A867 P0A867]
 +
** [http://www.uniprot.org/uniprot/Q9PIL5 Q9PIL5]
 +
** [http://www.uniprot.org/uniprot/Q58370 Q58370]
 +
** [http://www.uniprot.org/uniprot/P34214 P34214]
 +
** [http://www.uniprot.org/uniprot/P0A870 P0A870]
 +
** [http://www.uniprot.org/uniprot/P15019 P15019]
 +
** [http://www.uniprot.org/uniprot/P53228 P53228]
 +
** [http://www.uniprot.org/uniprot/P51778 P51778]
 +
** [http://www.uniprot.org/uniprot/P72797 P72797]
 +
** [http://www.uniprot.org/uniprot/O04894 O04894]
 +
** [http://www.uniprot.org/uniprot/P78865 P78865]
 +
</div>
 +
{{#set: ec-number=ec-2.2.1.2}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=0}}
 +
{{#set: nb pathway associated=5}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=added to improve flux in sugars}}
 +
{{#set: reconstruction source=add_expert_reactions}}

Latest revision as of 11:16, 17 October 2022

Reaction TRANSALDOL-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • NONOXIPENT-PWY, pentose phosphate pathway (non-oxidative branch):
    • 5 reactions found over 5 reactions in the full pathway
  • P124-PWY, Bifidobacterium shunt:
    • 13 reactions found over 15 reactions in the full pathway
  • PWY-5723, Rubisco shunt:
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-1861, formaldehyde assimilation II (assimilatory RuMP Cycle):
    • 9 reactions found over 9 reactions in the full pathway
  • P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle):
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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