Difference between revisions of "MALONYL-COA-ACP-TRANSACYL-RXN"

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(Created page with "Category:reaction == Reaction ExchangeSeed-Na+ == * direction: ** reversible == Reaction formula == * 1.0 Na+[C-BOUNDARY] '''<=>''' 1.0 Na+[e] == Gene(s) associate...")
(Created page with "Category:reaction == Reaction MALONYL-COA-ACP-TRANSACYL-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] ** [http://enzyme.expasy.org/EC/2.3.1.85...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ExchangeSeed-Na+ ==
+
== Reaction MALONYL-COA-ACP-TRANSACYL-RXN ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.39 ec-2.3.1.39]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** acp s-malonyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[Na+]][C-BOUNDARY] '''<=>''' 1.0 [[Na+]][e]
+
* 1 [[ACP]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MALONYL-ACP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS12070]]
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FISUC_RS14095]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS00290]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6799]], fatty acid biosynthesis (plant mitochondria):
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4381]], fatty acid biosynthesis initiation I:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-8012]], mupirocin biosynthesis:
 +
** '''2''' reactions found over '''26''' reactions in the full pathway
 +
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: nb gene associated=0}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01626 R01626]
−
{{#set: reconstruction category=manual}}
+
* UNIPROT:
−
{{#set: reconstruction tool=curation}}
+
** [http://www.uniprot.org/uniprot/P72391 P72391]
−
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
** [http://www.uniprot.org/uniprot/P49327 P49327]
−
{{#set: reconstruction source=import_from_medium}}
+
** [http://www.uniprot.org/uniprot/O34825 O34825]
 +
** [http://www.uniprot.org/uniprot/Q9RT24 Q9RT24]
 +
** [http://www.uniprot.org/uniprot/Q9JW58 Q9JW58]
 +
** [http://www.uniprot.org/uniprot/P0AAI9 P0AAI9]
 +
** [http://www.uniprot.org/uniprot/O24916 O24916]
 +
** [http://www.uniprot.org/uniprot/Q9JXR4 Q9JXR4]
 +
** [http://www.uniprot.org/uniprot/Q9ZCJ6 Q9ZCJ6]
 +
** [http://www.uniprot.org/uniprot/Q9YBK5 Q9YBK5]
 +
** [http://www.uniprot.org/uniprot/Q9PJ11 Q9PJ11]
 +
** [http://www.uniprot.org/uniprot/P43712 P43712]
 +
** [http://www.uniprot.org/uniprot/Q9Z8P1 Q9Z8P1]
 +
** [http://www.uniprot.org/uniprot/O67041 O67041]
 +
** [http://www.uniprot.org/uniprot/Q9ZMY1 Q9ZMY1]
 +
** [http://www.uniprot.org/uniprot/Q9PKF6 Q9PKF6]
 +
** [http://www.uniprot.org/uniprot/P63458 P63458]
 +
** [http://www.uniprot.org/uniprot/O84241 O84241]
 +
** [http://www.uniprot.org/uniprot/Q9WZQ5 Q9WZQ5]
 +
** [http://www.uniprot.org/uniprot/P71019 P71019]
 +
** [http://www.uniprot.org/uniprot/P07149 P07149]
 +
** [http://www.uniprot.org/uniprot/P73242 P73242]
 +
** [http://www.uniprot.org/uniprot/Q8RU07 Q8RU07]
 +
** [http://www.uniprot.org/uniprot/Q54205 Q54205]
 +
** [http://www.uniprot.org/uniprot/O54437 O54437]
 +
** [http://www.uniprot.org/uniprot/Q56692 Q56692]
 +
** [http://www.uniprot.org/uniprot/O13698 O13698]
 +
** [http://www.uniprot.org/uniprot/Q9RA34 Q9RA34]
 +
** [http://www.uniprot.org/uniprot/O69476 O69476]
 +
** [http://www.uniprot.org/uniprot/P12276 P12276]
 +
** [http://www.uniprot.org/uniprot/P12785 P12785]
 +
</div>
 +
{{#set: ec-number=ec-2.3.1.85|ec-2.3.1.39|ec-2.3.1.86}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=acp s-malonyltransferase}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ecoli|plantarum|bthetaiotaomicron|fibrobacter_succinogenes2|faecalibacterium|fibrobacter_succinogenes1}}

Latest revision as of 11:17, 17 October 2022

Reaction MALONYL-COA-ACP-TRANSACYL-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6799, fatty acid biosynthesis (plant mitochondria):
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-4381, fatty acid biosynthesis initiation I:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-8012, mupirocin biosynthesis:
    • 2 reactions found over 26 reactions in the full pathway
  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast):
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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