Difference between revisions of "3.1.13.5-RXN"

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(Created page with "Category:reaction == Reaction 2.6.1.64-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.64 ec-2.6.1.64] * direction: ** reversible == Reaction formula == * 1 GL...")
(Created page with "Category:reaction == Reaction 3.1.13.5-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.13.5 ec-3.1.13.5] * direction: ** left-to-right * common-name: ** ribonuclea...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.6.1.64-RXN ==
+
== Reaction 3.1.13.5-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.64 ec-2.6.1.64]
+
** [http://enzyme.expasy.org/EC/3.1.13.5 ec-3.1.13.5]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** ribonuclease d
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLN]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''<=>''' 1 [[2-KETO-GLUTARAMATE]][c] '''+''' 1 [[PHE]][c]
+
* 1 [[WATER]][c] '''+''' 1 [[tRNA-precursors]][c] '''=>''' 1 [[All-tRNAs]][c] '''+''' 1 [[Nucleoside-Monophosphates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS04330]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS02440]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_spontaneous]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-3.1.13.5}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17596 17596]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=ribonuclease d}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01375 R01375]
+
{{#set: nb gene associated=2}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q16773 Q16773]
 
−
** [http://www.uniprot.org/uniprot/P47039 P47039]
 
−
** [http://www.uniprot.org/uniprot/Q08415 Q08415]
 
−
** [http://www.uniprot.org/uniprot/Q9XX97 Q9XX97]
 
−
** [http://www.uniprot.org/uniprot/Q8MP09 Q8MP09]
 
−
** [http://www.uniprot.org/uniprot/O14209 O14209]
 
−
{{#set: ec-number=ec-2.6.1.64}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: nb gene associated=0}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_spontaneous}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:17, 17 October 2022

Reaction 3.1.13.5-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • ribonuclease d

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=3.1.13.5-RXN&oldid=92931"