Difference between revisions of "2.6.1.33-RXN"

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(Created page with "Category:reaction == Reaction RXN-8001 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.23 ec-1.1.1.23] * direction: ** left-to-right * common-name: ** histidinol deh...")
(Created page with "Category:reaction == Reaction 2.6.1.33-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.33 ec-2.6.1.33] * direction: ** reversible == Reaction formula == * 1 2-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8001 ==
+
== Reaction 2.6.1.33-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.23 ec-1.1.1.23]
+
** [http://enzyme.expasy.org/EC/2.6.1.33 ec-2.6.1.33]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** histidinol dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HISTIDINOL]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HIS]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-472]][c] '''<=>''' 1 [[DTDP-DEOH-DEOXY-GLUCOSE]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS13855]]
+
* Gene: [[FSU_RS12295]]
−
** Category: [[annotation]]
+
** Category: [[manual]]
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
−
* Gene: [[FSU_RS00045]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6942]], dTDP-D-desosamine biosynthesis:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7316]], dTDP-N-acetylviosamine biosynthesis:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20641 20641]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19088 19088]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01158 R01158]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02773 R02773]
−
{{#set: ec-number=ec-1.1.1.23}}
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{{#set: ec-number=ec-2.6.1.33}}
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{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
−
{{#set: common-name=histidinol dehydrogenase}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=add_expert_reactions}}
−
{{#set: reconstruction source=ecoli|bifidobacterium|plantarum|bthetaiotaomicron|fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
 

Latest revision as of 11:18, 17 October 2022

Reaction 2.6.1.33-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6942, dTDP-D-desosamine biosynthesis:
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7316, dTDP-N-acetylviosamine biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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