Difference between revisions of "PANTOATE-BETA-ALANINE-LIG-RXN"

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(Created page with "Category:reaction == Reaction SPERMINE-SYNTHASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22] * direction: ** left-to-right * common-name: ** s...")
(Created page with "Category:reaction == Reaction PANTOATE-BETA-ALANINE-LIG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.2.1 ec-6.3.2.1] * direction: ** left-to-right * common-name...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SPERMINE-SYNTHASE-RXN ==
+
== Reaction PANTOATE-BETA-ALANINE-LIG-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.22 ec-2.5.1.22]
+
** [http://enzyme.expasy.org/EC/6.3.2.1 ec-6.3.2.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** spermine synthase
+
** pantoate--beta-alanine ligase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[SPERMIDINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMINE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[B-ALANINE]][c] '''+''' 1 [[L-PANTOATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PANTOTHENATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS05810]]
+
* Gene: [[FSU_RS14205]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FISUC_RS12235]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[FSU_RS07710]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ARGSPECAT-PWY]], spermine biosynthesis:
+
* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[POLYAMINSYN3-PWY]], superpathway of polyamine biosynthesis II:
 
−
** '''4''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19974 19974]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10913 10913]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02869 R02869]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02473 R02473]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P52788 P52788]
+
** [http://www.uniprot.org/uniprot/P31663 P31663]
−
{{#set: ec-number=ec-2.5.1.22}}
+
** [http://www.uniprot.org/uniprot/Q9PIK2 Q9PIK2]
 +
** [http://www.uniprot.org/uniprot/P56061 P56061]
 +
** [http://www.uniprot.org/uniprot/P57035 P57035]
 +
** [http://www.uniprot.org/uniprot/Q9ZN52 Q9ZN52]
 +
** [http://www.uniprot.org/uniprot/Q09673 Q09673]
 +
** [http://www.uniprot.org/uniprot/O24210 O24210]
 +
** [http://www.uniprot.org/uniprot/Q9X713 Q9X713]
 +
{{#set: ec-number=ec-6.3.2.1}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=spermine synthase}}
+
{{#set: common-name=pantoate--beta-alanine ligase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
+
{{#set: reconstruction source=ecoli|fibrobacter_succinogenes2|fibrobacter_succinogenes1|bthetaiotaomicron}}

Latest revision as of 11:18, 17 October 2022

Reaction PANTOATE-BETA-ALANINE-LIG-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • pantoate--beta-alanine ligase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PANTO-PWY, phosphopantothenate biosynthesis I:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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