Difference between revisions of "FSU RS02705"
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(Created page with "Category:gene == Gene FSU_RS11915 == * transcription-direction: ** negative * centisome-position: ** 75.21538 * left-end-position: ** 2890530 * right-end-position: **...") |
(Created page with "Category:gene == Gene FSU_RS02705 == * transcription-direction: ** positive * centisome-position: ** 16.496834 * left-end-position: ** 633974 * right-end-position: **...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene FSU_RS02705 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 16.496834 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 633974 |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 635203 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[fsucgem]] | * [[fsucgem]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ACETYLHOMOSER-CYS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[ACSERLY-RXN]] |
| − | {{#set: centisome-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: right-end-position= | + | * [[O-ACETYLHOMOSERINE-THIOL-LYASE-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[O-SUCCHOMOSERLYASE-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
| + | * [[RXN-12726]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-5344]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[CYSTSYN-PWY]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-7174]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-I9]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-801]] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[HOMOSER-METSYN-PWY]] | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6936]] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: centisome-position=16.496834 }} | ||
| + | {{#set: left-end-position=633974}} | ||
| + | {{#set: right-end-position=635203}} | ||
{{#set: organism associated=fsucgem}} | {{#set: organism associated=fsucgem}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
| + | {{#set: nb pathway associated=7}} | ||
Latest revision as of 11:19, 17 October 2022
Contents
Gene FSU_RS02705
- transcription-direction:
- positive
- centisome-position:
- 16.496834
- left-end-position:
- 633974
- right-end-position:
- 635203
Organism(s) associated with this gene
Reaction(s) associated
- ACETYLHOMOSER-CYS-RXN
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: annotation
- ACSERLY-RXN
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: annotation
- O-ACETYLHOMOSERINE-THIOL-LYASE-RXN
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: annotation
- O-SUCCHOMOSERLYASE-RXN
- Category: orthology
- source: ecoli; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- Category: orthology
- RXN-12726
- Category: annotation
- source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5344
- 2 reactions found over 2 reactions in the full pathway
- CYSTSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-7174
- 1 reactions found over 4 reactions in the full pathway
- PWY-I9
- 5 reactions found over 5 reactions in the full pathway
- PWY-801
- 2 reactions found over 4 reactions in the full pathway
- HOMOSER-METSYN-PWY
- 6 reactions found over 7 reactions in the full pathway
- PWY-6936
- 3 reactions found over 5 reactions in the full pathway
