Difference between revisions of "FSU RS01435"

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(Created page with "Category:gene == Gene FSU_RS04900 == * transcription-direction: ** positive * centisome-position: ** 30.17923 * left-end-position: ** 1159789 * right-end-position: **...")
(Created page with "Category:gene == Gene FSU_RS01435 == * common-name: ** coba * transcription-direction: ** negative * centisome-position: ** 8.809384 * left-end-position: ** 338545 * r...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS04900 ==
+
== Gene FSU_RS01435 ==
 +
* common-name:
 +
** coba
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* centisome-position:
 
* centisome-position:
−
** 30.17923    
+
** 8.809384    
 
* left-end-position:
 
* left-end-position:
−
** 1159789
+
** 338545
 
* right-end-position:
 
* right-end-position:
−
** 1160412
+
** 340122
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[fsucgem]]
 
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CHLORAMPHENICOL-O-ACETYLTRANSFERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.1.1.133-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* [[DIMETHUROPORDEHYDROG-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* [[RXN-13403]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
** Category: [[orthology]]
−
{{#set: centisome-position=30.17923   }}
+
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
{{#set: left-end-position=1159789}}
+
* [[RXN-8675]]
−
{{#set: right-end-position=1160412}}
+
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SIROHEME-FERROCHELAT-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* [[UROPORIIIMETHYLTRANSA-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-7376]]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5194]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7377]]
 +
** '''15''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5196]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: common-name=coba}}
 +
{{#set: transcription-direction=negative}}
 +
{{#set: centisome-position=8.809384   }}
 +
{{#set: left-end-position=338545}}
 +
{{#set: right-end-position=340122}}
 
{{#set: organism associated=fsucgem}}
 
{{#set: organism associated=fsucgem}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:19, 17 October 2022

Gene FSU_RS01435

  • common-name:
    • coba
  • transcription-direction:
    • negative
  • centisome-position:
    • 8.809384
  • left-end-position:
    • 338545
  • right-end-position:
    • 340122

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7376
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-5194
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7377
    • 15 reactions found over 15 reactions in the full pathway
  • PWY-5196
    • 3 reactions found over 7 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS01435&oldid=93757"