Difference between revisions of "FSU RS14505"

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(Created page with "Category:gene == Gene FSU_RS09455 == * common-name: ** arga * transcription-direction: ** positive * centisome-position: ** 59.312378 * left-end-position: ** 2279377 *...")
(Created page with "Category:gene == Gene FSU_RS14505 == * transcription-direction: ** positive * centisome-position: ** 91.88088 * left-end-position: ** 3530986 * right-end-position: **...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS09455 ==
+
== Gene FSU_RS14505 ==
−
* common-name:
 
−
** arga
 
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* centisome-position:
 
* centisome-position:
−
** 59.312378    
+
** 91.88088    
 
* left-end-position:
 
* left-end-position:
−
** 2279377
+
** 3530986
 
* right-end-position:
 
* right-end-position:
−
** 2280732
+
** 3531831
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[fsucgem]]
 
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[N-ACETYLTRANSFER-RXN]]
+
* [[FUMARATE-REDUCTASE-NADH-RXN]]
 +
** Category: [[manual]]
 +
*** source: [[add_expert_reactions]]; tool: [[unknown-tool]]; comment: added to improve flux in sugars
 +
* [[RXN-14971]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-15378]]
−
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
** Category: [[annotation]]
−
* [[RXN0-6948]]
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE6-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[GLUTORN-PWY]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-561]]
−
* [[PWY-5154]]
+
** '''6''' reactions found over '''4''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[TCA]]
−
* [[ARGSYNBSUB-PWY]]
+
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7254]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: common-name=arga}}
+
* [[PWY-5690]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6969]]
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
* [[P105-PWY]]
 +
** '''8''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-3781]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1353]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1329]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7279]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4302]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=59.312378   }}
+
{{#set: centisome-position=91.88088   }}
−
{{#set: left-end-position=2279377}}
+
{{#set: left-end-position=3530986}}
−
{{#set: right-end-position=2280732}}
+
{{#set: right-end-position=3531831}}
 
{{#set: organism associated=fsucgem}}
 
{{#set: organism associated=fsucgem}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=13}}

Latest revision as of 11:19, 17 October 2022

Gene FSU_RS14505

  • transcription-direction:
    • positive
  • centisome-position:
    • 91.88088
  • left-end-position:
    • 3530986
  • right-end-position:
    • 3531831

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-561
    • 6 reactions found over 4 reactions in the full pathway
  • TCA
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-7254
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6969
    • 9 reactions found over 12 reactions in the full pathway
  • P105-PWY
    • 8 reactions found over 11 reactions in the full pathway
  • PWY-6728
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-3781
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-1353
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1329
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7279
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-4302
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-398
    • 7 reactions found over 11 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS14505&oldid=93816"