Difference between revisions of "FSU RS15615"

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(Created page with "Category:gene == Gene FISUC_RS00910 == * common-name: ** trpb * transcription-direction: ** positive * centisome-position: ** 5.361191 * left-end-position: ** 206011 *...")
(Created page with "Category:gene == Gene FSU_RS15615 == * common-name: ** ilvb * transcription-direction: ** negative * centisome-position: ** 98.8706 * left-end-position: ** 3799601 * r...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FISUC_RS00910 ==
+
== Gene FSU_RS15615 ==
 
* common-name:
 
* common-name:
−
** trpb
+
** ilvb
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* centisome-position:
 
* centisome-position:
−
** 5.361191    
+
** 98.8706    
 
* left-end-position:
 
* left-end-position:
−
** 206011
+
** 3799601
 
* right-end-position:
 
* right-end-position:
−
** 207288
+
** 3801319
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[fsucgem]]
 
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN0-2381]]
+
* [[ACETOLACTSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-2382]]
+
** Category: [[orthology]]
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* [[ACETOOHBUTSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TRYPSYN-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6949]]
+
* [[PWY-7111]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[TRPSYN-PWY]]
+
* [[PWY-5939]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: common-name=trpb}}
+
* [[PWY-6389]]
−
{{#set: transcription-direction=positive}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: centisome-position=5.361191   }}
+
* [[PWY-5938]]
−
{{#set: left-end-position=206011}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: right-end-position=207288}}
+
* [[VALSYN-PWY]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5103]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[ILEUSYN-PWY]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5104]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5101]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: common-name=ilvb}}
 +
{{#set: transcription-direction=negative}}
 +
{{#set: centisome-position=98.8706   }}
 +
{{#set: left-end-position=3799601}}
 +
{{#set: right-end-position=3801319}}
 
{{#set: organism associated=fsucgem}}
 
{{#set: organism associated=fsucgem}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:20, 17 October 2022

Gene FSU_RS15615

  • common-name:
    • ilvb
  • transcription-direction:
    • negative
  • centisome-position:
    • 98.8706
  • left-end-position:
    • 3799601
  • right-end-position:
    • 3801319

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7111
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5939
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6389
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5938
    • 2 reactions found over 3 reactions in the full pathway
  • VALSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5103
    • 4 reactions found over 7 reactions in the full pathway
  • ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5104
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5101
    • 3 reactions found over 8 reactions in the full pathway





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