Difference between revisions of "ACETALD-DEHYDROG-RXN"

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(Created page with "Category:reaction == Reaction RXN-11480 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100] * direction: ** left-to-right * common-name: ** 3-oxoacyl-a...")
(Created page with "Category:reaction == Reaction ACETALD-DEHYDROG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.10 ec-1.2.1.10] * direction: ** reversible == Reaction formula ==...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11480 ==
+
== Reaction ACETALD-DEHYDROG-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/1.2.1.10 ec-1.2.1.10]
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** 3-oxoacyl-acp reductase fabg
 
−
** 3-oxoacyl-[acyl-carrier-protein] reductase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[ACETALD]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS15070]]
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* Gene: [[FSU_RS01760]]
−
** Category: [[annotation]]
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** Category: [[manual]]
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*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
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* Gene: [[FISUC_RS10110]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FSU_RS01260]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FSU_RS12065]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I:
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** '''11''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-7085]], triethylamine degradation:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii):
 +
** '''9''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY0-1477]], ethanolamine utilization:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[FERMENTATION-PWY]], mixed acid fermentation:
 +
** '''14''' reactions found over '''16''' reactions in the full pathway
 +
* [[P161-PWY]], acetylene degradation (anaerobic):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5436]], L-threonine degradation IV:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation:
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5162]], 2-hydroxypenta-2,4-dienoate degradation:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PHOSPHONOTASE-PWY]], 2-aminoethylphosphonate degradation I:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[ETOH-ACETYLCOA-ANA-PWY]], ethanol degradation I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7180]], 2'-deoxy-&alpha;-D-ribose 1-phosphate degradation:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5480]], pyruvate fermentation to ethanol I:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6587]], pyruvate fermentation to ethanol III:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
</div>
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-1.1.1.100}}
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* RHEA:
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{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23291 23291]
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{{#set: common-name=3-oxoacyl-[acyl-carrier-protein] reductase|3-oxoacyl-acp reductase fabg}}
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* LIGAND-RXN:
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{{#set: nb gene associated=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00228 R00228]
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{{#set: nb pathway associated=1}}
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* UNIPROT:
−
{{#set: reconstruction category=annotation}}
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** [http://www.uniprot.org/uniprot/Q52434 Q52434]
−
{{#set: reconstruction tool=pathwaytools}}
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** [http://www.uniprot.org/uniprot/P0A9Q7 P0A9Q7]
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{{#set: reconstruction comment=n.a}}
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** [http://www.uniprot.org/uniprot/P77580 P77580]
−
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
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** [http://www.uniprot.org/uniprot/P71866 P71866]
 +
** [http://www.uniprot.org/uniprot/Q52060 Q52060]
 +
** [http://www.uniprot.org/uniprot/Q52016 Q52016]
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** [http://www.uniprot.org/uniprot/O85978 O85978]
 +
{{#set: ec-number=ec-1.2.1.10}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=13}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
 +
{{#set: reconstruction source=add_expert_reactions}}

Latest revision as of 11:16, 17 October 2022

Reaction ACETALD-DEHYDROG-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7085, triethylamine degradation:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii):
    • 9 reactions found over 7 reactions in the full pathway
  • PWY0-1477, ethanolamine utilization:
    • 4 reactions found over 5 reactions in the full pathway
  • FERMENTATION-PWY, mixed acid fermentation:
    • 14 reactions found over 16 reactions in the full pathway
  • P161-PWY, acetylene degradation (anaerobic):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5436, L-threonine degradation IV:
    • 2 reactions found over 2 reactions in the full pathway
  • P122-PWY, heterolactic fermentation:
    • 14 reactions found over 18 reactions in the full pathway
  • PWY-5162, 2-hydroxypenta-2,4-dienoate degradation:
    • 1 reactions found over 3 reactions in the full pathway
  • PHOSPHONOTASE-PWY, 2-aminoethylphosphonate degradation I:
    • 1 reactions found over 3 reactions in the full pathway
  • ETOH-ACETYLCOA-ANA-PWY, ethanol degradation I:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7180, 2'-deoxy-α-D-ribose 1-phosphate degradation:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5480, pyruvate fermentation to ethanol I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6587, pyruvate fermentation to ethanol III:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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